Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm26018-201ENSMUST00000104406 128 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Mir881-201ENSMUST00000104844 78 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm11923-201ENSMUST00000118135 508 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm14627-201ENSMUST00000118931 567 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm17014-201ENSMUST00000120765 168 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm13511-201ENSMUST00000121167 363 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm13430-201ENSMUST00000121366 288 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm13077-201ENSMUST00000121941 484 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm25321-201ENSMUST00000122558 102 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm25865-201ENSMUST00000158247 104 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm20545-201ENSMUST00000174739 210 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm22857-201ENSMUST00000174969 134 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm34176-201ENSMUST00000192621 474 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm43855-201ENSMUST00000197462 507 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm45200-201ENSMUST00000207434 919 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ube3bQ9ES34 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm12808-201ENSMUST00000120597 404 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm24240-201ENSMUST00000157785 135 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm43724-201ENSMUST00000197516 226 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm44776-201ENSMUST00000207212 381 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm45002-201ENSMUST00000208045 120 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm45422-201ENSMUST00000211476 246 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 AC093926.1-201ENSMUST00000213730 243 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 AC157570.3-201ENSMUST00000219281 205 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm5457-201ENSMUST00000022260 333 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm23721-201ENSMUST00000083005 107 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm22704-201ENSMUST00000083027 137 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Mir496a-201ENSMUST00000093627 79 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm43281-201ENSMUST00000202522 2704 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ube3bQ9ES34 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm44894-201ENSMUST00000205280 2174 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm38091-201ENSMUST00000192418 3871 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm11912-201ENSMUST00000117235 264 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm14915-201ENSMUST00000120747 204 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm14298-201ENSMUST00000139032 237 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm16356-201ENSMUST00000143300 169 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm5699-201ENSMUST00000152491 723 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm24501-201ENSMUST00000158452 62 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm22308-201ENSMUST00000177609 107 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm27410-201ENSMUST00000183851 115 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm29350-201ENSMUST00000189141 541 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm7825-201ENSMUST00000204046 416 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm44609-201ENSMUST00000207157 460 ntBASIC6.31□□□□□ -1.4
Ube3bQ9ES34 Gm45157-201ENSMUST00000208729 401 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms