Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm24167-201ENSMUST00000177733 124 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm24028-201ENSMUST00000178991 124 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Mir6355-201ENSMUST00000183687 106 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm18413-201ENSMUST00000221573 655 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm25202-201ENSMUST00000082838 191 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm25792-201ENSMUST00000083289 100 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm24454-201ENSMUST00000083349 132 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm37514-201ENSMUST00000194512 2753 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Mir676-201ENSMUST00000102443 89 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm25915-201ENSMUST00000104265 126 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm13250-201ENSMUST00000117209 753 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm7931-201ENSMUST00000121537 271 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm14559-201ENSMUST00000121745 496 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm15986-201ENSMUST00000122153 400 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm25433-201ENSMUST00000158283 286 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm26731-201ENSMUST00000180683 543 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm11395-201ENSMUST00000181011 499 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm11394-201ENSMUST00000181421 517 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm18036-201ENSMUST00000195256 272 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm2602-201ENSMUST00000202112 571 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm44157-201ENSMUST00000204720 410 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm19900-201ENSMUST00000207285 576 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm9068-201ENSMUST00000217393 455 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm31931-201ENSMUST00000219666 222 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm25126-201ENSMUST00000083343 102 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim42Q9D2H5 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm23311-201ENSMUST00000104152 134 ntBASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm23836-201ENSMUST00000104434 129 ntBASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm14628-201ENSMUST00000117508 635 ntBASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm15553-201ENSMUST00000118757 430 ntBASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm12890-201ENSMUST00000120885 373 ntBASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim42Q9D2H5 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.37□□□□□ -1.55
Trim42Q9D2H5 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms