Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm43826-201ENSMUST00000199604 2612 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm24160-201ENSMUST00000104594 126 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm14107-201ENSMUST00000117774 330 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm15382-201ENSMUST00000118011 537 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm15480-201ENSMUST00000120442 519 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm25292-201ENSMUST00000122797 322 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm16060-201ENSMUST00000153140 478 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm22216-201ENSMUST00000157557 114 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm22519-201ENSMUST00000158270 178 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm20673-201ENSMUST00000177167 430 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm25670-201ENSMUST00000178423 107 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm23141-201ENSMUST00000178682 94 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm26239-201ENSMUST00000178842 107 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm24267-201ENSMUST00000179841 107 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm26950-201ENSMUST00000182734 498 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm42539-201ENSMUST00000197009 308 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm43142-201ENSMUST00000198670 361 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm2623-201ENSMUST00000199229 286 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm45742-201ENSMUST00000212400 433 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 AC161758.1-201ENSMUST00000226123 310 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 AC139350.4-201ENSMUST00000228483 798 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm24292-201ENSMUST00000082888 107 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm24446-201ENSMUST00000083982 156 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Gm3867-201ENSMUST00000086108 279 ntBASIC5.02□□□□□ -1.61
RpainQ9CWY9 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RpainQ9CWY9 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RpainQ9CWY9 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm24578-201ENSMUST00000103970 129 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm15670-201ENSMUST00000117740 447 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm11262-201ENSMUST00000119326 833 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm11890-201ENSMUST00000119585 417 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm13356-201ENSMUST00000121678 335 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm22208-201ENSMUST00000122658 110 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm22870-201ENSMUST00000157501 112 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm23534-201ENSMUST00000157539 97 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Ear-ps12-201ENSMUST00000161720 451 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm20674-201ENSMUST00000177452 369 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm23047-201ENSMUST00000177661 94 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm22621-201ENSMUST00000179678 74 ntBASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RpainQ9CWY9 Gm28263-201ENSMUST00000185884 400 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms