Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm13009-201ENSMUST00000121307 267 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm12872-201ENSMUST00000121835 320 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm15212-201ENSMUST00000122403 466 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm22597-201ENSMUST00000157602 80 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Mir1963-201ENSMUST00000158594 59 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm6486-201ENSMUST00000166202 434 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm20545-201ENSMUST00000174739 210 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm24949-201ENSMUST00000183609 215 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Mir6238-201ENSMUST00000184140 129 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm43804-201ENSMUST00000198280 456 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm43418-201ENSMUST00000201334 428 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm44336-201ENSMUST00000203696 468 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Gm25682-201ENSMUST00000083942 164 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 CT030170.3-201ENSMUST00000221205 1815 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Fus-202ENSMUST00000079045 2623 ntBASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim11Q99PQ2 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm15215-201ENSMUST00000117773 489 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm11219-201ENSMUST00000118565 358 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm11742-201ENSMUST00000119903 233 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm22960-201ENSMUST00000122517 104 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm25643-201ENSMUST00000158874 103 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm26731-201ENSMUST00000180683 543 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm7266-201ENSMUST00000187999 405 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm2623-201ENSMUST00000199229 286 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm8132-201ENSMUST00000204938 640 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 CT030242.3-201ENSMUST00000221231 581 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.75□□□□□ -1.49
Trim11Q99PQ2 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim11Q99PQ2 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm24640-201ENSMUST00000116949 126 ntBASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm22626-201ENSMUST00000116990 126 ntBASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm8595-201ENSMUST00000118250 630 ntBASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm14578-201ENSMUST00000122166 391 ntBASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm6956-201ENSMUST00000134724 546 ntBASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm24944-201ENSMUST00000158330 128 ntBASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm7958-201ENSMUST00000178255 468 ntBASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm23450-201ENSMUST00000178285 91 ntBASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm24761-201ENSMUST00000179589 127 ntBASIC5.74□□□□□ -1.49
Trim11Q99PQ2 Gm7950-201ENSMUST00000179633 468 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms