Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Usp11Q99K46 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Usp11Q99K46 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm22591-201ENSMUST00000104243 106 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Mir208b-201ENSMUST00000104735 77 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm22072-201ENSMUST00000116850 121 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm23885-201ENSMUST00000122682 294 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Usp11Q99K46 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm24289-201ENSMUST00000157629 135 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm23499-201ENSMUST00000157736 268 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm23554-201ENSMUST00000157818 110 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm25553-201ENSMUST00000158076 79 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm26173-201ENSMUST00000158416 136 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm16588-201ENSMUST00000162889 355 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm21991-201ENSMUST00000180006 508 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm21070-201ENSMUST00000182425 985 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Mir6996-201ENSMUST00000183922 61 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.19□□□□□ -1.74
Usp11Q99K46 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm38395-201ENSMUST00000199904 830 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.19□□□□□ -1.74
Usp11Q99K46 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Usp11Q99K46 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.18□□□□□ -1.74
Usp11Q99K46 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Usp11Q99K46 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm23319-201ENSMUST00000104467 131 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm15180-201ENSMUST00000117745 492 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm12016-201ENSMUST00000119079 681 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm12044-201ENSMUST00000120335 213 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm14875-201ENSMUST00000120881 319 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm22613-201ENSMUST00000122679 292 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm17421-201ENSMUST00000167845 674 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm23269-201ENSMUST00000178701 107 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm5974-201ENSMUST00000181607 986 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Mir3620-201ENSMUST00000184710 61 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm4854-201ENSMUST00000185902 574 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm19224-201ENSMUST00000190477 793 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm38234-201ENSMUST00000195204 421 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm43070-201ENSMUST00000196938 415 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm17887-201ENSMUST00000200194 547 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm7946-201ENSMUST00000203326 958 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC4.18□□□□□ -1.74
Usp11Q99K46 Gm46146-201ENSMUST00000217483 346 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC4.18□□□□□ -1.74
Usp11Q99K46 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 AC160999.1-201ENSMUST00000225675 810 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Usp11Q99K46 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Usp11Q99K46 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Usp11Q99K46 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.18□□□□□ -1.74
Usp11Q99K46 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Usp11Q99K46 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Usp11Q99K46 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.17□□□□□ -1.74
Usp11Q99K46 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Usp11Q99K46 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm14881-201ENSMUST00000120366 372 ntBASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm12358-201ENSMUST00000121842 520 ntBASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm14473-201ENSMUST00000122269 557 ntBASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm11506-201ENSMUST00000122414 470 ntBASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm26028-201ENSMUST00000158660 294 ntBASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm17054-201ENSMUST00000169811 259 ntBASIC4.17□□□□□ -1.74
Usp11Q99K46 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm11392-201ENSMUST00000181419 710 ntBASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm27538-201ENSMUST00000185065 294 ntBASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm28974-201ENSMUST00000187893 231 ntBASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.17□□□□□ -1.74
Usp11Q99K46 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms