Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm28661-201ENSMUST00000188231 681 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Trav15d-3-201ENSMUST00000198604 167 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm44389-201ENSMUST00000203795 182 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm17780-201ENSMUST00000207142 612 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm18597-201ENSMUST00000209519 694 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm45392-201ENSMUST00000210441 214 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ushbp1Q8R370 AC099578.1-201ENSMUST00000220147 435 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 AC154241.1-201ENSMUST00000223952 356 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 AC154358.1-201ENSMUST00000224871 218 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 AL590614.1-201ENSMUST00000226037 268 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ushbp1Q8R370 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm23099-201ENSMUST00000083454 139 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ushbp1Q8R370 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ushbp1Q8R370 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Ushbp1Q8R370 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Ushbp1Q8R370 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm23481-201ENSMUST00000104173 131 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm12427-201ENSMUST00000117719 302 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm12571-201ENSMUST00000118132 243 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm14901-201ENSMUST00000119001 283 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm14303-201ENSMUST00000121320 171 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm24745-201ENSMUST00000157840 85 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm25555-201ENSMUST00000158078 111 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm24315-201ENSMUST00000177835 127 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm28802-201ENSMUST00000188624 944 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm18296-201ENSMUST00000192475 783 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm45063-201ENSMUST00000203726 472 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm6112-201ENSMUST00000208037 629 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm44910-201ENSMUST00000208451 396 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm45316-201ENSMUST00000210128 162 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm45434-201ENSMUST00000210550 293 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Rny3-201ENSMUST00000083011 102 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm22293-201ENSMUST00000083314 109 ntBASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Ushbp1Q8R370 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm7834-201ENSMUST00000117560 437 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm13386-201ENSMUST00000117677 124 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm14766-201ENSMUST00000121689 367 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm23789-201ENSMUST00000122536 301 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm22080-201ENSMUST00000157591 106 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm22536-201ENSMUST00000158171 134 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm25748-201ENSMUST00000175487 70 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm23568-201ENSMUST00000177960 92 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm24829-201ENSMUST00000179245 92 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Mir7658-201ENSMUST00000184043 57 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm17929-201ENSMUST00000186851 627 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm42999-201ENSMUST00000198049 786 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 AC134334.1-201ENSMUST00000214277 255 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ushbp1Q8R370 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms