Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm27392-201ENSMUST00000185041 101 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm19637-201ENSMUST00000185933 579 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm37578-201ENSMUST00000192256 1177 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm37343-201ENSMUST00000192542 111 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm44294-201ENSMUST00000205090 728 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm19709-201ENSMUST00000215403 482 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Olfr936-202ENSMUST00000216912 937 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm17820-201ENSMUST00000220213 1068 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC4.34□□□□□ -1.71
Nup88Q8CEC0 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 CT009733.1-203ENSMUST00000224033 451 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm5265-201ENSMUST00000076828 342 ntBASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nup88Q8CEC0 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nup88Q8CEC0 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.72
Nup88Q8CEC0 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm11252-201ENSMUST00000120572 939 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm25105-201ENSMUST00000122477 130 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm23754-201ENSMUST00000157576 63 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm2966-201ENSMUST00000166052 481 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm20693-201ENSMUST00000177431 211 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm22776-201ENSMUST00000178634 94 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm23767-201ENSMUST00000179278 94 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Mir6411-201ENSMUST00000183556 108 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm8023-201ENSMUST00000195298 903 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm3333-202ENSMUST00000221763 1044 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nup88Q8CEC0 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm24987-201ENSMUST00000104453 134 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm6079-201ENSMUST00000121356 404 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm12358-201ENSMUST00000121842 520 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm25667-201ENSMUST00000157701 275 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm24930-201ENSMUST00000158315 83 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm22840-201ENSMUST00000158444 136 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Mup-ps7-201ENSMUST00000178292 545 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Mup-ps8-201ENSMUST00000178663 545 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Mup-ps9-201ENSMUST00000178847 545 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm28637-201ENSMUST00000179424 345 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Mup-ps6-201ENSMUST00000179564 545 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm27445-201ENSMUST00000184484 72 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm21489-201ENSMUST00000189668 818 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm37709-201ENSMUST00000195074 600 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm5317-201ENSMUST00000204445 847 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm7726-201ENSMUST00000206241 231 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm7407-201ENSMUST00000208301 568 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm45379-201ENSMUST00000211772 549 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm7540-201ENSMUST00000219764 926 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 AC121114.1-201ENSMUST00000228522 570 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm12582-201ENSMUST00000030555 697 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm24626-201ENSMUST00000082621 161 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm22423-201ENSMUST00000082861 184 ntBASIC4.32□□□□□ -1.72
Nup88Q8CEC0 Gm21286-201ENSMUST00000098035 545 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms