Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm26458-201ENSMUST00000082832 128 ntBASIC2.58□□□□□ -2
Col6a6Q8C6K9 Gm4017-201ENSMUST00000084813 338 ntBASIC2.58□□□□□ -2
Col6a6Q8C6K9 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col6a6Q8C6K9 Gm21034-201ENSMUST00000207390 2608 ntBASIC2.58□□□□□ -2
Col6a6Q8C6K9 Gm21035-201ENSMUST00000207867 2608 ntBASIC2.58□□□□□ -2
Col6a6Q8C6K9 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Col6a6Q8C6K9 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col6a6Q8C6K9 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col6a6Q8C6K9 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col6a6Q8C6K9 Gm22073-201ENSMUST00000122668 189 ntBASIC2.58□□□□□ -2
Col6a6Q8C6K9 Gm17166-201ENSMUST00000172006 431 ntBASIC2.58□□□□□ -2
Col6a6Q8C6K9 Gm8649-201ENSMUST00000181799 233 ntBASIC2.58□□□□□ -2
Col6a6Q8C6K9 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col6a6Q8C6K9 Gm38041-201ENSMUST00000194445 661 ntBASIC2.58□□□□□ -2
Col6a6Q8C6K9 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col6a6Q8C6K9 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Col6a6Q8C6K9 Gm44525-201ENSMUST00000183129 2634 ntBASIC2.58□□□□□ -2
Col6a6Q8C6K9 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Col6a6Q8C6K9 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col6a6Q8C6K9 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col6a6Q8C6K9 Gm23128-201ENSMUST00000104257 132 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm24274-201ENSMUST00000116787 124 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm24291-201ENSMUST00000157633 162 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm22099-201ENSMUST00000157925 123 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm7258-201ENSMUST00000179317 300 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm23128-202ENSMUST00000196578 133 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm43892-201ENSMUST00000204373 265 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm18997-201ENSMUST00000216353 822 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm2719-201ENSMUST00000191929 444 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm37989-201ENSMUST00000195202 803 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Mir378a-201ENSMUST00000198300 66 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm45031-201ENSMUST00000206800 288 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm5917-201ENSMUST00000217638 721 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Col6a6Q8C6K9 AC173482.3-201ENSMUST00000225492 1212 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Mir184-201ENSMUST00000083662 69 ntBASIC2.57□□□□□ -2
Col6a6Q8C6K9 Gm43443-201ENSMUST00000202337 2393 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm11387-201ENSMUST00000120266 772 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm8880-201ENSMUST00000121800 454 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm25820-202ENSMUST00000197479 128 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col6a6Q8C6K9 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a6Q8C6K9 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col6a6Q8C6K9 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Col6a6Q8C6K9 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm7709-201ENSMUST00000199391 1858 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm37899-201ENSMUST00000193116 8717 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Col6a6Q8C6K9 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm24670-201ENSMUST00000104154 132 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm13555-201ENSMUST00000121668 319 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm25866-201ENSMUST00000158245 112 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm2427-201ENSMUST00000189121 881 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.56□□□□□ -2
Col6a6Q8C6K9 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.56□□□□□ -2
Col6a6Q8C6K9 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.55□□□□□ -2
Col6a6Q8C6K9 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Gm23011-201ENSMUST00000104148 132 ntBASIC2.55□□□□□ -2
Col6a6Q8C6K9 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Gm23902-201ENSMUST00000157571 134 ntBASIC2.55□□□□□ -2
Col6a6Q8C6K9 Gm23268-201ENSMUST00000175494 78 ntBASIC2.55□□□□□ -2
Col6a6Q8C6K9 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC2.55□□□□□ -2
Col6a6Q8C6K9 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Snora31-201ENSMUST00000083213 130 ntBASIC2.55□□□□□ -2
Col6a6Q8C6K9 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Col6a6Q8C6K9 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms