Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm17072-201ENSMUST00000166673 658 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm4842-201ENSMUST00000183237 835 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm44214-201ENSMUST00000204153 606 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm45200-201ENSMUST00000207434 919 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm23508-201ENSMUST00000083079 72 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm26164-201ENSMUST00000083793 104 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm44925-201ENSMUST00000208879 2110 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.98□□□□□ -1.45
Trim47Q8C0E3 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm24715-201ENSMUST00000102377 95 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm25758-201ENSMUST00000103987 129 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm12785-201ENSMUST00000122052 172 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm23167-201ENSMUST00000157155 103 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm26350-201ENSMUST00000157531 288 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm24501-201ENSMUST00000158452 62 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm24577-201ENSMUST00000158580 63 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm24675-201ENSMUST00000158757 259 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm27541-201ENSMUST00000184078 122 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Mir7028-201ENSMUST00000185016 64 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm29227-201ENSMUST00000187139 315 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm29034-201ENSMUST00000188099 315 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm37129-201ENSMUST00000195791 315 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm18016-201ENSMUST00000216119 801 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 AC154636.2-201ENSMUST00000222538 161 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 AC129202.3-201ENSMUST00000224413 733 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm22571-201ENSMUST00000082984 70 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm23721-201ENSMUST00000083005 107 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Mir133b-201ENSMUST00000083546 119 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm37064-201ENSMUST00000193851 2231 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.97□□□□□ -1.45
Trim47Q8C0E3 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Trim47Q8C0E3 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim47Q8C0E3 AC122355.1-201ENSMUST00000228155 4184 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Mir193b-201ENSMUST00000103784 79 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm12721-201ENSMUST00000120621 268 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm13009-201ENSMUST00000121307 267 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm24409-201ENSMUST00000157881 152 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm5263-201ENSMUST00000163646 601 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm28683-201ENSMUST00000187134 615 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm28840-205ENSMUST00000189320 615 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm28835-203ENSMUST00000190062 615 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm44330-201ENSMUST00000200106 143 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm44184-201ENSMUST00000204290 132 ntBASIC5.96□□□□□ -1.46
Trim47Q8C0E3 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Trim47Q8C0E3 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms