Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm23499-201ENSMUST00000157736 268 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm24438-201ENSMUST00000157893 115 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm23023-201ENSMUST00000158767 109 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm17060-201ENSMUST00000172394 824 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm20701-201ENSMUST00000176082 347 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm28974-201ENSMUST00000187893 231 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm43708-201ENSMUST00000198857 961 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm17991-201ENSMUST00000208139 297 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 AC157017.2-201ENSMUST00000218354 777 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm7034-201ENSMUST00000218638 645 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 AC144628.1-201ENSMUST00000227943 466 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm23516-201ENSMUST00000093728 107 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Usp43Q8BUM9 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.16□□□□□ -1.74
Usp43Q8BUM9 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.15□□□□□ -1.74
Usp43Q8BUM9 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.15□□□□□ -1.74
Usp43Q8BUM9 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Usp43Q8BUM9 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.15□□□□□ -1.74
Usp43Q8BUM9 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Usp43Q8BUM9 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Usp43Q8BUM9 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Usp43Q8BUM9 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Usp43Q8BUM9 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Usp43Q8BUM9 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm24715-201ENSMUST00000102377 95 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm23424-201ENSMUST00000103889 110 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm12564-201ENSMUST00000119860 321 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm13743-201ENSMUST00000121486 724 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm25806-201ENSMUST00000122782 122 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm9593-201ENSMUST00000166034 469 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Mir6996-201ENSMUST00000183922 61 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm28343-201ENSMUST00000185386 112 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm43070-201ENSMUST00000196938 415 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 AC161426.1-201ENSMUST00000214137 286 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 AC168059.1-201ENSMUST00000225846 841 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm25699-201ENSMUST00000082896 167 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm24928-201ENSMUST00000083399 107 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Mir28a-201ENSMUST00000083560 86 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm25897-201ENSMUST00000083709 107 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm23875-201ENSMUST00000083711 318 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm336-201ENSMUST00000186376 1480 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.15□□□□□ -1.75
Usp43Q8BUM9 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
Usp43Q8BUM9 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Usp43Q8BUM9 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp43Q8BUM9 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.14□□□□□ -1.75
Usp43Q8BUM9 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
Usp43Q8BUM9 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp43Q8BUM9 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Usp43Q8BUM9 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Usp43Q8BUM9 Gm24430-201ENSMUST00000104077 104 ntBASIC4.14□□□□□ -1.75
Usp43Q8BUM9 Gm24125-201ENSMUST00000104105 137 ntBASIC4.14□□□□□ -1.75
Usp43Q8BUM9 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Usp43Q8BUM9 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.14□□□□□ -1.75
Usp43Q8BUM9 Gm14586-201ENSMUST00000119571 408 ntBASIC4.14□□□□□ -1.75
Usp43Q8BUM9 Gm12379-201ENSMUST00000119607 391 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms