Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 AL606472.1-201ENSMUST00000224628 275 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm37642-201ENSMUST00000193166 1735 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm13681-201ENSMUST00000117925 210 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm14013-201ENSMUST00000119006 270 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm14732-201ENSMUST00000121372 545 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm25106-201ENSMUST00000122672 134 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm7953-201ENSMUST00000168278 469 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm8207-201ENSMUST00000171204 502 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Ighv2-8-201ENSMUST00000193935 262 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm7407-201ENSMUST00000208301 568 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.37□□□□□ -1.55
Ubp1Q811S7 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 CT009600.1-201ENSMUST00000228771 337 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm26446-201ENSMUST00000082455 103 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.37□□□□□ -1.55
Ubp1Q811S7 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Ubp1Q811S7 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm17752-201ENSMUST00000185787 3726 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm20287-201ENSMUST00000172848 2367 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm14657-201ENSMUST00000117461 302 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm11447-201ENSMUST00000118983 858 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm7189-201ENSMUST00000119811 429 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm14269-201ENSMUST00000120455 306 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm8061-201ENSMUST00000122380 350 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm23779-201ENSMUST00000157938 64 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm23141-201ENSMUST00000178682 94 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm37416-201ENSMUST00000193596 318 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm9202-201ENSMUST00000223036 437 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 AC154515.2-201ENSMUST00000226093 406 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm10237-201ENSMUST00000078393 273 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Snora30-201ENSMUST00000083325 130 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 AC133079.1-201ENSMUST00000220943 1881 ntBASIC5.36□□□□□ -1.55
Ubp1Q811S7 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Ubp1Q811S7 Gm43736-201ENSMUST00000196377 2281 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms