Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm12691-201ENSMUST00000120186 456 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm14428-201ENSMUST00000120408 822 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm11363-201ENSMUST00000121672 548 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm5353-201ENSMUST00000139800 793 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm25923-201ENSMUST00000158312 138 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm22136-201ENSMUST00000158751 268 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm20428-201ENSMUST00000174365 283 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm4557-201ENSMUST00000185826 907 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm4526-201ENSMUST00000186039 920 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm28615-201ENSMUST00000187527 482 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm8708-201ENSMUST00000188500 906 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm28389-201ENSMUST00000190090 697 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm37743-201ENSMUST00000194645 376 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm19418-201ENSMUST00000197436 580 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm43309-201ENSMUST00000200837 458 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm44259-201ENSMUST00000204996 298 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.64□□□□□ -1.51
Trim56Q80VI1 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm2829-201ENSMUST00000213121 499 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm22508-201ENSMUST00000082772 110 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm44679-201ENSMUST00000207202 2908 ntBASIC5.64□□□□□ -1.51
Trim56Q80VI1 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.64□□□□□ -1.51
Trim56Q80VI1 Gm45033-201ENSMUST00000206710 3167 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim56Q80VI1 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm14669-201ENSMUST00000118841 250 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm13973-201ENSMUST00000121371 894 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm26098-201ENSMUST00000157247 288 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm7094-201ENSMUST00000178379 366 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm27028-201ENSMUST00000182303 399 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm19206-201ENSMUST00000186401 827 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm28506-201ENSMUST00000189937 150 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm37961-201ENSMUST00000192729 299 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm37715-201ENSMUST00000193206 235 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm42814-201ENSMUST00000199370 460 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm7675-201ENSMUST00000208828 686 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm45857-201ENSMUST00000212207 356 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 AC109180.1-201ENSMUST00000218676 398 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm18507-201ENSMUST00000218855 525 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm8785-201ENSMUST00000220259 487 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 AC134420.1-201ENSMUST00000227027 289 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm23300-201ENSMUST00000082712 125 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.63□□□□□ -1.51
Trim56Q80VI1 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trim56Q80VI1 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm13082-201ENSMUST00000118877 561 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm15981-201ENSMUST00000119196 457 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm15745-201ENSMUST00000119807 115 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.62□□□□□ -1.51
Trim56Q80VI1 Gm23542-201ENSMUST00000158208 96 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC5.62□□□□□ -1.51
Trim56Q80VI1 Mir3066-201ENSMUST00000175296 83 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms