Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 CT025616.1-201ENSMUST00000221158 412 ntBASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Mir298-201ENSMUST00000083476 82 ntBASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Gm29084-201ENSMUST00000185587 1452 ntBASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.87□□□□□ -1.63
Scaf4Q6PFF0 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm14520-201ENSMUST00000119258 387 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm15803-201ENSMUST00000120118 394 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm13009-201ENSMUST00000121307 267 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm23902-201ENSMUST00000157571 134 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm24690-201ENSMUST00000157759 97 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm22210-201ENSMUST00000158101 144 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Mir6401-201ENSMUST00000184499 109 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm4557-201ENSMUST00000185826 907 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm4526-201ENSMUST00000186039 920 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm8708-201ENSMUST00000188500 906 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm28468-201ENSMUST00000188536 615 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm2719-201ENSMUST00000191929 444 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm43405-201ENSMUST00000198642 337 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm45150-201ENSMUST00000206051 467 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm45146-201ENSMUST00000207108 221 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm25929-201ENSMUST00000082784 107 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Scaf4Q6PFF0 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm11936-201ENSMUST00000118323 160 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm14516-201ENSMUST00000120012 252 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm11584-201ENSMUST00000120636 325 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm11677-201ENSMUST00000121349 977 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm22601-201ENSMUST00000157595 250 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm23225-201ENSMUST00000158121 114 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm28283-201ENSMUST00000185509 178 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm37746-201ENSMUST00000193249 198 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm18551-201ENSMUST00000195594 642 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 n-TStga1-201ENSMUST00000199903 109 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm44523-201ENSMUST00000205616 417 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm18507-201ENSMUST00000218855 525 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm2446-201ENSMUST00000220144 772 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Scaf4Q6PFF0 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms