Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm27754-201ENSMUST00000183340 126 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Mir6401-201ENSMUST00000184499 109 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm37757-201ENSMUST00000193072 210 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm43717-201ENSMUST00000198684 310 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm44011-201ENSMUST00000203336 394 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm44765-201ENSMUST00000206927 601 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm44820-201ENSMUST00000207420 396 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm45422-201ENSMUST00000211476 246 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm17989-201ENSMUST00000211543 412 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm7128-201ENSMUST00000211639 533 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 CT010455.1-201ENSMUST00000218579 413 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 AC160931.2-201ENSMUST00000221445 351 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 AC159621.1-201ENSMUST00000223249 163 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 AC120553.1-201ENSMUST00000227313 260 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm23447-201ENSMUST00000082798 163 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Mir31-201ENSMUST00000083474 106 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Mir19a-201ENSMUST00000083482 82 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Gm37456-201ENSMUST00000193176 5837 ntBASIC5.24□□□□□ -1.57
Sh3rf1Q69ZI1 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm25879-201ENSMUST00000104330 107 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm8289-201ENSMUST00000144814 1182 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm25643-201ENSMUST00000158874 103 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm10319-202ENSMUST00000159439 846 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm28967-201ENSMUST00000187351 281 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm33952-201ENSMUST00000197795 408 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 AC159380.1-201ENSMUST00000218096 121 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm20368-201ENSMUST00000220716 301 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 AC133156.1-202ENSMUST00000227284 363 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm23451-201ENSMUST00000083328 122 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm25937-201ENSMUST00000083912 107 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm9386-201ENSMUST00000095195 381 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm11743-201ENSMUST00000117385 1735 ntBASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.23□□□□□ -1.57
Sh3rf1Q69ZI1 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm11556-201ENSMUST00000120751 288 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm23537-201ENSMUST00000157536 330 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm23354-201ENSMUST00000158426 104 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm25362-201ENSMUST00000158854 105 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm22307-201ENSMUST00000180019 107 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm28654-201ENSMUST00000189801 379 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm44322-201ENSMUST00000196830 115 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm19131-201ENSMUST00000203408 789 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm44074-201ENSMUST00000204562 337 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm7675-201ENSMUST00000208828 686 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm45660-201ENSMUST00000210267 151 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 AC167229.1-201ENSMUST00000220057 469 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm7822-201ENSMUST00000222433 581 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 AC125311.1-201ENSMUST00000226950 220 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm24457-201ENSMUST00000083196 105 ntBASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Sh3rf1Q69ZI1 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms