Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cln3Q61124 AC171206.2-201ENSMUST00000215252 389 ntBASIC5.89□□□□□ -1.47
Cln3Q61124 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.89□□□□□ -1.47
Cln3Q61124 AC133598.3-201ENSMUST00000224322 568 ntBASIC5.89□□□□□ -1.47
Cln3Q61124 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.89□□□□□ -1.47
Cln3Q61124 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Cln3Q61124 Gm5670-201ENSMUST00000093546 372 ntBASIC5.89□□□□□ -1.47
Cln3Q61124 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cln3Q61124 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
Cln3Q61124 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cln3Q61124 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cln3Q61124 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Cln3Q61124 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cln3Q61124 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cln3Q61124 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cln3Q61124 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cln3Q61124 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Cln3Q61124 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cln3Q61124 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.88□□□□□ -1.47
Cln3Q61124 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cln3Q61124 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cln3Q61124 Gm15670-201ENSMUST00000117740 447 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Gm11781-201ENSMUST00000118328 472 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Gm17014-201ENSMUST00000120765 168 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Gm5699-201ENSMUST00000152491 723 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Gm23829-201ENSMUST00000157392 270 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Gm22725-201ENSMUST00000158092 110 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.88□□□□□ -1.47
Cln3Q61124 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.88□□□□□ -1.47
Cln3Q61124 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.88□□□□□ -1.47
Cln3Q61124 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.88□□□□□ -1.47
Cln3Q61124 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Cln3Q61124 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 AC144819.1-201ENSMUST00000227015 620 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 AC118639.1-201ENSMUST00000227204 338 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Cln3Q61124 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Gm23626-201ENSMUST00000082458 133 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Gm22358-201ENSMUST00000082877 122 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Gm25188-201ENSMUST00000083913 122 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Gm25207-201ENSMUST00000093745 107 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Cln3Q61124 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.88□□□□□ -1.47
Cln3Q61124 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cln3Q61124 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cln3Q61124 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Cln3Q61124 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Cln3Q61124 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Cln3Q61124 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.87□□□□□ -1.47
Cln3Q61124 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cln3Q61124 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cln3Q61124 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Cln3Q61124 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Cln3Q61124 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cln3Q61124 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cln3Q61124 Gm22778-201ENSMUST00000104090 128 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Gm23879-201ENSMUST00000116874 126 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Gm12852-201ENSMUST00000119478 719 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Gm12281-201ENSMUST00000119536 298 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Gm14831-201ENSMUST00000120253 409 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Gm25293-201ENSMUST00000122792 285 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Gm26041-201ENSMUST00000158148 108 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Gm4842-201ENSMUST00000183237 835 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cln3Q61124 Gm27410-201ENSMUST00000183851 115 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.87□□□□□ -1.47
Cln3Q61124 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC5.87□□□□□ -1.47
Cln3Q61124 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cln3Q61124 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cln3Q61124 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Cln3Q61124 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cln3Q61124 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cln3Q61124 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cln3Q61124 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.87□□□□□ -1.47
Cln3Q61124 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cln3Q61124 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Cln3Q61124 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.87□□□□□ -1.47
Cln3Q61124 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Cln3Q61124 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Cln3Q61124 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.86□□□□□ -1.47
Cln3Q61124 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Cln3Q61124 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cln3Q61124 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.86□□□□□ -1.47
Cln3Q61124 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms