Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm43501-201ENSMUST00000202513 107 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 CT009600.1-201ENSMUST00000228771 337 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm23626-201ENSMUST00000082458 133 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Snord15b-201ENSMUST00000083032 145 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Mir133a-2-201ENSMUST00000083526 104 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm25004-201ENSMUST00000083811 161 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav3-1Q5R1I8 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Snora64-201ENSMUST00000104521 134 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm22899-201ENSMUST00000104540 131 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm22676-201ENSMUST00000116972 129 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm14069-201ENSMUST00000120815 229 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm22320-201ENSMUST00000157149 312 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm23030-201ENSMUST00000158004 273 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm23895-201ENSMUST00000158108 160 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Mir6343-201ENSMUST00000183584 84 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm27155-201ENSMUST00000183716 898 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm42625-201ENSMUST00000198611 922 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm44060-201ENSMUST00000204440 410 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm29785-201ENSMUST00000217033 383 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm5185-201ENSMUST00000080271 619 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Snora23-201ENSMUST00000082517 184 ntBASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Olfr1134-201ENSMUST00000099857 1102 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav3-1Q5R1I8 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm9496-201ENSMUST00000191295 1601 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm37063-201ENSMUST00000194678 3520 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm26154-201ENSMUST00000102339 96 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm26423-201ENSMUST00000104277 128 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm12230-201ENSMUST00000118301 454 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm15014-201ENSMUST00000120742 258 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm24244-201ENSMUST00000157317 130 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Hmga1b-202ENSMUST00000178955 120 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Mir6537-201ENSMUST00000184150 110 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm18406-201ENSMUST00000185872 669 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm38097-201ENSMUST00000192936 439 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm18036-201ENSMUST00000195256 272 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm43384-201ENSMUST00000200569 637 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm6719-201ENSMUST00000202067 335 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm44927-201ENSMUST00000207573 716 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 AC127578.1-201ENSMUST00000227289 93 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Gm38162-201ENSMUST00000195562 4597 ntBASIC2□□□□□ -2.09
Trav3-1Q5R1I8 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm38382-201ENSMUST00000193790 2499 ntBASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trav3-1Q5R1I8 Gm23014-201ENSMUST00000104144 130 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms