Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Trav6d-4Q5R1I0 Gm38090-201ENSMUST00000195733 1942 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm43613-201ENSMUST00000199409 1613 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm37965-201ENSMUST00000195304 1362 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm7485-201ENSMUST00000119502 1109 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm4540-201ENSMUST00000170669 429 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm37828-201ENSMUST00000192496 432 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm6064-201ENSMUST00000203999 454 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm45710-201ENSMUST00000212847 215 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 AC137871.2-201ENSMUST00000226482 289 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Snora70-201ENSMUST00000083047 137 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 n-R5s86-201ENSMUST00000083215 119 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Trav6d-4Q5R1I0 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Gm14559-201ENSMUST00000121745 496 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Gm25066-201ENSMUST00000158145 123 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Gm28358-202ENSMUST00000189292 223 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Gm18984-201ENSMUST00000193998 1124 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 AC122924.1-201ENSMUST00000222044 163 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 AC099612.2-201ENSMUST00000226824 721 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Defa-ps18-201ENSMUST00000098889 371 ntBASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav6d-4Q5R1I0 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2.01
Trav6d-4Q5R1I0 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm12982-201ENSMUST00000117408 190 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm13009-201ENSMUST00000121307 267 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm11350-201ENSMUST00000121436 870 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm12819-201ENSMUST00000122223 629 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm22322-201ENSMUST00000157151 111 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm23380-201ENSMUST00000158448 103 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm24811-201ENSMUST00000175313 100 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm4479-201ENSMUST00000178807 171 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm28113-201ENSMUST00000188280 229 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm28155-201ENSMUST00000191066 151 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm18441-201ENSMUST00000223539 617 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Mir184-201ENSMUST00000083662 69 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm10212-201ENSMUST00000087884 324 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm43665-201ENSMUST00000198672 1659 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.52□□□□□ -2.01
Trav6d-4Q5R1I0 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms