Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm42614-201ENSMUST00000198724 1554 ntBASIC2.69□□□□□ -1.98
Trav3-3Q5R1C3 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Trav3-3Q5R1C3 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Trav3-3Q5R1C3 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Mir1198-201ENSMUST00000116995 121 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm14537-201ENSMUST00000117464 599 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm11698-201ENSMUST00000117948 455 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm13379-201ENSMUST00000118053 621 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm13678-201ENSMUST00000118926 340 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm15231-201ENSMUST00000119174 447 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm15387-201ENSMUST00000120421 648 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm22219-201ENSMUST00000157562 319 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm24289-201ENSMUST00000157629 135 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm25883-201ENSMUST00000157781 271 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm23198-201ENSMUST00000158811 91 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm17194-201ENSMUST00000164610 348 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm27355-201ENSMUST00000185045 128 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm2950-201ENSMUST00000185530 520 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm37164-201ENSMUST00000192809 637 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm44727-201ENSMUST00000204225 451 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 AC134254.4-201ENSMUST00000223086 370 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm5518-201ENSMUST00000084171 648 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Gm44434-201ENSMUST00000203918 3745 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.68□□□□□ -1.98
Trav3-3Q5R1C3 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Mir208b-201ENSMUST00000104735 77 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm15125-201ENSMUST00000116185 800 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm14517-201ENSMUST00000119040 337 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm16445-201ENSMUST00000120399 714 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm13574-201ENSMUST00000120482 394 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm13676-201ENSMUST00000122185 591 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm11575-201ENSMUST00000122243 228 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm25807-201ENSMUST00000122783 305 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm16250-201ENSMUST00000148974 256 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm24014-201ENSMUST00000157728 157 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm22890-201ENSMUST00000158642 144 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm16589-201ENSMUST00000159522 918 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Mir3062-201ENSMUST00000174986 105 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm22252-201ENSMUST00000179316 79 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm37878-201ENSMUST00000192108 387 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm18547-201ENSMUST00000192439 811 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm4248-201ENSMUST00000196905 316 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm45162-201ENSMUST00000209013 618 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm9712-201ENSMUST00000210842 311 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm18645-202ENSMUST00000212222 760 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 AC166343.1-201ENSMUST00000213261 577 ntBASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trav3-3Q5R1C3 Gm46327-201ENSMUST00000218240 365 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms