Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm44776-201ENSMUST00000207212 381 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm45207-201ENSMUST00000207469 145 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 AC125374.2-201ENSMUST00000214278 162 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 AC166902.1-201ENSMUST00000216653 517 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm37195-201ENSMUST00000192006 3018 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm37101-201ENSMUST00000191656 3660 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm43210-201ENSMUST00000196743 6152 ntBASIC9.35□□□□□ -0.91
Trim41Q5NCC3 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm24715-201ENSMUST00000102377 95 ntBASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm25096-201ENSMUST00000104043 129 ntBASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm16017-201ENSMUST00000119834 208 ntBASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm22718-201ENSMUST00000122701 315 ntBASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Gm27540-201ENSMUST00000184950 187 ntBASIC9.34□□□□□ -0.91
Trim41Q5NCC3 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 n-R5s62-201ENSMUST00000082780 96 ntBASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Trim41Q5NCC3 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Gm24482-201ENSMUST00000117005 93 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Gm15905-201ENSMUST00000137042 298 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Gm27851-201ENSMUST00000183529 63 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Igkv2-105-201ENSMUST00000196931 377 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Gm8745-201ENSMUST00000207846 782 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 AC159380.1-201ENSMUST00000218096 121 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 AC157570.3-201ENSMUST00000219281 205 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 AC156790.5-201ENSMUST00000227075 231 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Gm23623-201ENSMUST00000082461 107 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Gm22741-201ENSMUST00000083438 165 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Trim41Q5NCC3 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 AC121844.3-201ENSMUST00000219124 1785 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm43025-201ENSMUST00000201764 1886 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm12785-201ENSMUST00000122052 172 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm15213-201ENSMUST00000122098 216 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm25058-201ENSMUST00000157365 128 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Mir6414-201ENSMUST00000183685 82 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Mir7014-201ENSMUST00000183853 63 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm37568-201ENSMUST00000191755 364 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Olfr1285-201ENSMUST00000208523 903 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 AL662807.1-201ENSMUST00000224183 126 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm23939-201ENSMUST00000082880 133 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm23508-201ENSMUST00000083079 72 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Gm26263-201ENSMUST00000083281 164 ntBASIC9.32□□□□□ -0.92
Trim41Q5NCC3 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Trim41Q5NCC3 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Trim41Q5NCC3 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Trim41Q5NCC3 Gm43027-201ENSMUST00000202906 3691 ntBASIC9.31□□□□□ -0.92
Trim41Q5NCC3 Gm11290-204ENSMUST00000224688 3042 ntBASIC9.31□□□□□ -0.92
Trim41Q5NCC3 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 348.7 ms