Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm37219-201ENSMUST00000192036 926 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm5552-201ENSMUST00000197149 515 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm44824-201ENSMUST00000207021 229 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm4928-201ENSMUST00000219622 850 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 AC153975.1-201ENSMUST00000220087 926 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Gm10237-201ENSMUST00000078393 273 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
Upf3bQ3ULL6 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm12090-201ENSMUST00000118692 758 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm6762-201ENSMUST00000121769 289 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm26100-201ENSMUST00000157245 127 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm15946-201ENSMUST00000160654 423 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm17075-201ENSMUST00000171924 670 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm20574-201ENSMUST00000182867 917 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Mir6408-201ENSMUST00000183643 91 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm33973-201ENSMUST00000195148 534 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm45063-201ENSMUST00000203726 472 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm45189-201ENSMUST00000208567 363 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 CT025552.1-201ENSMUST00000224561 521 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.5□□□□□ -1.85
Upf3bQ3ULL6 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm22590-201ENSMUST00000104247 128 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm26423-201ENSMUST00000104277 128 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm23609-201ENSMUST00000104542 127 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm12693-201ENSMUST00000121965 483 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm27538-201ENSMUST00000185065 294 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm29105-201ENSMUST00000187256 450 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm29525-201ENSMUST00000189844 699 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm19418-201ENSMUST00000197436 580 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm44092-201ENSMUST00000204470 258 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm18585-201ENSMUST00000215197 556 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm5265-201ENSMUST00000076828 342 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm25739-201ENSMUST00000082886 107 ntBASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Upf3bQ3ULL6 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Gm24715-201ENSMUST00000102377 95 ntBASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Gm14564-201ENSMUST00000122159 294 ntBASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Gm23667-201ENSMUST00000157466 120 ntBASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Gm22722-201ENSMUST00000157467 132 ntBASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Gm22833-201ENSMUST00000158292 132 ntBASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Gm24666-201ENSMUST00000158937 167 ntBASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Gm27580-201ENSMUST00000183666 149 ntBASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Gm27648-201ENSMUST00000184315 107 ntBASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.48□□□□□ -1.85
Upf3bQ3ULL6 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms