Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm28596-201ENSMUST00000185870 696 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm32295-201ENSMUST00000192558 696 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm31260-201ENSMUST00000193478 696 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm7041-201ENSMUST00000201227 524 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm45628-201ENSMUST00000210849 274 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 AC153971.2-201ENSMUST00000214553 777 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 AL590614.1-201ENSMUST00000226037 268 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Rnf180Q3U827 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.28□□□□□ -1.56
Rnf180Q3U827 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rnf180Q3U827 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm25407-201ENSMUST00000104102 134 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm14591-201ENSMUST00000120407 518 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm15379-201ENSMUST00000121224 648 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm25559-201ENSMUST00000157182 74 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm3470-201ENSMUST00000160819 420 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm6501-201ENSMUST00000187178 916 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm43892-201ENSMUST00000204373 265 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm35876-201ENSMUST00000205044 459 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 AC168059.1-201ENSMUST00000225846 841 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 AC121898.1-201ENSMUST00000227599 288 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 AC117202.3-201ENSMUST00000228532 310 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm23297-201ENSMUST00000083184 127 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm6177-201ENSMUST00000085589 465 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 AC159193.2-201ENSMUST00000220865 4251 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Gm38278-201ENSMUST00000194715 1365 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.27□□□□□ -1.57
Rnf180Q3U827 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Rnf180Q3U827 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm42537-201ENSMUST00000198260 2574 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm3940-201ENSMUST00000105087 432 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm15087-201ENSMUST00000117465 1172 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Defa-ps9-201ENSMUST00000118264 276 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm11522-201ENSMUST00000120533 176 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm12368-201ENSMUST00000122251 434 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm4134-201ENSMUST00000173244 563 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm5527-201ENSMUST00000179821 642 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Mir496b-201ENSMUST00000184935 113 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.26□□□□□ -1.57
Rnf180Q3U827 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm28389-201ENSMUST00000190090 697 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm37603-201ENSMUST00000192368 219 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Gm37239-201ENSMUST00000193510 141 ntBASIC5.26□□□□□ -1.57
Rnf180Q3U827 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms