Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.08□□□□□ -1.6
Ssrp1Q08943 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Ssrp1Q08943 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.08□□□□□ -1.6
Ssrp1Q08943 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ssrp1Q08943 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ssrp1Q08943 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ssrp1Q08943 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ssrp1Q08943 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.08□□□□□ -1.6
Ssrp1Q08943 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm25106-201ENSMUST00000122672 134 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm24251-201ENSMUST00000157324 114 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm23546-201ENSMUST00000158211 137 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm22851-201ENSMUST00000178741 94 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm25074-201ENSMUST00000178782 94 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm38008-201ENSMUST00000195333 518 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm44371-201ENSMUST00000204148 467 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm44961-201ENSMUST00000207450 196 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm45735-201ENSMUST00000212779 319 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.07□□□□□ -1.6
Ssrp1Q08943 AC152946.2-201ENSMUST00000219071 337 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 AC147633.1-201ENSMUST00000225134 259 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 CT009510.2-203ENSMUST00000226704 2136 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 AC144819.1-201ENSMUST00000227015 620 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Ear14-201ENSMUST00000049559 468 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm22229-201ENSMUST00000082987 108 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm14415-201ENSMUST00000118260 1578 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ssrp1Q08943 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.07□□□□□ -1.6
Ssrp1Q08943 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 AC154323.3-201ENSMUST00000226927 1660 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm22020-201ENSMUST00000104358 136 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm13239-201ENSMUST00000119920 637 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm13220-201ENSMUST00000121535 508 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm13149-201ENSMUST00000122071 339 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm26348-201ENSMUST00000157528 240 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm24689-201ENSMUST00000157760 104 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Scarna6-201ENSMUST00000158656 265 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm22529-201ENSMUST00000158817 123 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm19932-201ENSMUST00000177033 313 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Mir7006-201ENSMUST00000183624 69 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm28625-201ENSMUST00000188309 205 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm42924-201ENSMUST00000197261 185 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Trav15d-3-201ENSMUST00000198604 167 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm42990-201ENSMUST00000199231 312 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm44054-201ENSMUST00000203814 372 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm44879-201ENSMUST00000207007 503 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm45857-201ENSMUST00000212207 356 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Supt4b-201ENSMUST00000214434 351 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm18442-201ENSMUST00000220925 639 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 AC154426.1-201ENSMUST00000225614 1132 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm23302-201ENSMUST00000082710 100 ntBASIC5.06□□□□□ -1.6
Ssrp1Q08943 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.06□□□□□ -1.6
Ssrp1Q08943 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms