Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm11388-201ENSMUST00000120908 159 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm22597-201ENSMUST00000157602 80 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm24584-201ENSMUST00000157972 107 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm25194-201ENSMUST00000177987 79 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm22286-201ENSMUST00000179708 107 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Mir6413-201ENSMUST00000184049 108 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Mir6238-201ENSMUST00000184140 129 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm43309-201ENSMUST00000200837 458 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm43415-201ENSMUST00000201934 750 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm45365-201ENSMUST00000209489 256 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm45722-201ENSMUST00000213075 466 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm7034-201ENSMUST00000218638 645 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.37□□□□□ -1.71
Col8a1Q00780 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.37□□□□□ -1.71
Col8a1Q00780 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm22749-201ENSMUST00000082490 107 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm24856-201ENSMUST00000082809 107 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm25258-201ENSMUST00000083049 107 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm24535-201ENSMUST00000083140 107 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm22352-201ENSMUST00000083917 107 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm44829-201ENSMUST00000208008 3193 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Col8a1Q00780 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.37□□□□□ -1.71
Col8a1Q00780 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col8a1Q00780 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
Col8a1Q00780 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col8a1Q00780 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col8a1Q00780 AW046200-203ENSMUST00000211787 2479 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm43857-201ENSMUST00000200343 3079 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col8a1Q00780 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col8a1Q00780 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm25097-201ENSMUST00000104042 145 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm23608-201ENSMUST00000104545 128 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm13567-201ENSMUST00000118026 247 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm11447-201ENSMUST00000118983 858 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm7840-201ENSMUST00000122086 533 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm23837-201ENSMUST00000122656 286 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm16250-201ENSMUST00000148974 256 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm26034-201ENSMUST00000158154 116 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Mir5624-201ENSMUST00000176635 61 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm29147-201ENSMUST00000186846 315 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm28160-201ENSMUST00000191229 315 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col8a1Q00780 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm43804-201ENSMUST00000198280 456 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm42428-201ENSMUST00000198677 302 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm2623-201ENSMUST00000199229 286 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm45157-201ENSMUST00000208729 401 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 AC153954.2-201ENSMUST00000213811 287 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm18488-201ENSMUST00000215082 364 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm6988-201ENSMUST00000222676 375 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm6043-201ENSMUST00000099961 492 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col8a1Q00780 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Col8a1Q00780 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Col8a1Q00780 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Col8a1Q00780 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.36□□□□□ -1.71
Col8a1Q00780 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col8a1Q00780 Gm37049-201ENSMUST00000194356 1983 ntBASIC4.35□□□□□ -1.71
Col8a1Q00780 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 150.6 ms