Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Mir6905-201ENSMUST00000184228 70 ntBASIC4.48□□□□□ -1.69
Cux1P53564 Gm37293-201ENSMUST00000191658 295 ntBASIC4.48□□□□□ -1.69
Cux1P53564 Gm23128-202ENSMUST00000196578 133 ntBASIC4.48□□□□□ -1.69
Cux1P53564 Gm4859-201ENSMUST00000199625 787 ntBASIC4.48□□□□□ -1.69
Cux1P53564 Gm6850-201ENSMUST00000210031 530 ntBASIC4.48□□□□□ -1.69
Cux1P53564 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cux1P53564 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cux1P53564 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cux1P53564 Gm8074-201ENSMUST00000095071 252 ntBASIC4.48□□□□□ -1.69
Cux1P53564 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cux1P53564 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cux1P53564 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.48□□□□□ -1.69
Cux1P53564 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cux1P53564 Gm8880-201ENSMUST00000121800 454 ntBASIC4.47□□□□□ -1.69
Cux1P53564 Gm26933-201ENSMUST00000182320 827 ntBASIC4.47□□□□□ -1.69
Cux1P53564 Gm28534-201ENSMUST00000187744 676 ntBASIC4.47□□□□□ -1.69
Cux1P53564 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.47□□□□□ -1.69
Cux1P53564 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.47□□□□□ -1.69
Cux1P53564 Gm44623-201ENSMUST00000207934 434 ntBASIC4.47□□□□□ -1.69
Cux1P53564 AC133517.1-203ENSMUST00000225570 390 ntBASIC4.47□□□□□ -1.69
Cux1P53564 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cux1P53564 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cux1P53564 Gm44675-201ENSMUST00000208188 2927 ntBASIC4.47□□□□□ -1.69
Cux1P53564 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cux1P53564 Gm14562-201ENSMUST00000129885 543 ntBASIC4.46□□□□□ -1.69
Cux1P53564 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC4.46□□□□□ -1.69
Cux1P53564 Gm6374-201ENSMUST00000159051 788 ntBASIC4.46□□□□□ -1.69
Cux1P53564 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Cux1P53564 Gm25707-201ENSMUST00000175120 96 ntBASIC4.46□□□□□ -1.69
Cux1P53564 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.46□□□□□ -1.69
Cux1P53564 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.46□□□□□ -1.69
Cux1P53564 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.46□□□□□ -1.69
Cux1P53564 Mir21a-201ENSMUST00000083521 92 ntBASIC4.46□□□□□ -1.69
Cux1P53564 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.46□□□□□ -1.7
Cux1P53564 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cux1P53564 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cux1P53564 Gm26342-201ENSMUST00000104557 129 ntBASIC4.46□□□□□ -1.7
Cux1P53564 Gm14659-201ENSMUST00000117667 843 ntBASIC4.46□□□□□ -1.7
Cux1P53564 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cux1P53564 Gm23162-201ENSMUST00000175081 121 ntBASIC4.46□□□□□ -1.7
Cux1P53564 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.46□□□□□ -1.7
Cux1P53564 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC4.46□□□□□ -1.7
Cux1P53564 Trbv7-201ENSMUST00000193339 402 ntBASIC4.46□□□□□ -1.7
Cux1P53564 Gm42539-201ENSMUST00000197009 308 ntBASIC4.46□□□□□ -1.7
Cux1P53564 Gm45312-201ENSMUST00000210566 311 ntBASIC4.46□□□□□ -1.7
Cux1P53564 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cux1P53564 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cux1P53564 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cux1P53564 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cux1P53564 Gm11221-201ENSMUST00000117230 597 ntBASIC4.45□□□□□ -1.7
Cux1P53564 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.45□□□□□ -1.7
Cux1P53564 Gm24816-201ENSMUST00000175311 151 ntBASIC4.45□□□□□ -1.7
Cux1P53564 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC4.45□□□□□ -1.7
Cux1P53564 Gm42581-201ENSMUST00000201774 966 ntBASIC4.45□□□□□ -1.7
Cux1P53564 Gm7422-201ENSMUST00000220115 640 ntBASIC4.45□□□□□ -1.7
Cux1P53564 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cux1P53564 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cux1P53564 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.44□□□□□ -1.7
Cux1P53564 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.44□□□□□ -1.7
Cux1P53564 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
Cux1P53564 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Cux1P53564 Gm38382-201ENSMUST00000193790 2499 ntBASIC4.44□□□□□ -1.7
Cux1P53564 Gm14142-201ENSMUST00000117833 296 ntBASIC4.44□□□□□ -1.7
Cux1P53564 Gm14971-201ENSMUST00000117980 663 ntBASIC4.44□□□□□ -1.7
Cux1P53564 Gm14926-201ENSMUST00000120650 508 ntBASIC4.44□□□□□ -1.7
Cux1P53564 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC4.44□□□□□ -1.7
Cux1P53564 Gm25153-201ENSMUST00000157118 156 ntBASIC4.44□□□□□ -1.7
Cux1P53564 Gm46234-201ENSMUST00000218702 259 ntBASIC4.44□□□□□ -1.7
Cux1P53564 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC4.44□□□□□ -1.7
Cux1P53564 AC154594.1-201ENSMUST00000225171 1273 ntBASIC4.44□□□□□ -1.7
Cux1P53564 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Cux1P53564 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
Cux1P53564 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.43□□□□□ -1.7
Cux1P53564 Gm37515-201ENSMUST00000193321 3817 ntBASIC4.43□□□□□ -1.7
Cux1P53564 Gm14768-201ENSMUST00000122126 678 ntBASIC4.43□□□□□ -1.7
Cux1P53564 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC4.43□□□□□ -1.7
Cux1P53564 Gm25116-201ENSMUST00000157191 122 ntBASIC4.43□□□□□ -1.7
Cux1P53564 Gm24443-201ENSMUST00000157242 132 ntBASIC4.43□□□□□ -1.7
Cux1P53564 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Cux1P53564 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.43□□□□□ -1.7
Cux1P53564 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC4.43□□□□□ -1.7
Cux1P53564 AC160984.2-201ENSMUST00000224927 791 ntBASIC4.43□□□□□ -1.7
Cux1P53564 Olfr192-201ENSMUST00000080251 925 ntBASIC4.43□□□□□ -1.7
Cux1P53564 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cux1P53564 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cux1P53564 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Cux1P53564 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.43□□□□□ -1.7
Cux1P53564 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Cux1P53564 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Cux1P53564 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.42□□□□□ -1.7
Cux1P53564 Gm13532-201ENSMUST00000120373 240 ntBASIC4.42□□□□□ -1.7
Cux1P53564 Gm24291-201ENSMUST00000157633 162 ntBASIC4.42□□□□□ -1.7
Cux1P53564 Snord93-201ENSMUST00000175580 71 ntBASIC4.42□□□□□ -1.7
Cux1P53564 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC4.42□□□□□ -1.7
Cux1P53564 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.42□□□□□ -1.7
Cux1P53564 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.42□□□□□ -1.7
Cux1P53564 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC4.42□□□□□ -1.7
Cux1P53564 LOC667541-201ENSMUST00000223408 278 ntBASIC4.42□□□□□ -1.7
Cux1P53564 Gm6325-201ENSMUST00000122015 3114 ntBASIC4.42□□□□□ -1.7
Cux1P53564 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms