Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.35□□□□□ -1.87
Nkx2-1P50220 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.35□□□□□ -1.87
Nkx2-1P50220 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 Gm5338-201ENSMUST00000209530 639 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 AC117797.2-201ENSMUST00000224419 531 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 CT025552.2-201ENSMUST00000225497 317 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 AC131747.1-201ENSMUST00000226159 793 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC3.35□□□□□ -1.87
Nkx2-1P50220 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC3.35□□□□□ -1.87
Nkx2-1P50220 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx2-1P50220 Gm6776-201ENSMUST00000057752 900 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Nkx2-1P50220 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 Gm24611-201ENSMUST00000083272 107 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx2-1P50220 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.35□□□□□ -1.87
Nkx2-1P50220 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx2-1P50220 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Nkx2-1P50220 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Nkx2-1P50220 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Nkx2-1P50220 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm24951-201ENSMUST00000102182 109 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm23063-201ENSMUST00000102350 93 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Mir667-201ENSMUST00000102441 92 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm12982-201ENSMUST00000117408 190 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm15110-201ENSMUST00000117545 881 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm12509-201ENSMUST00000118033 609 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm14731-201ENSMUST00000119216 376 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm13973-201ENSMUST00000121371 894 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm16412-201ENSMUST00000121602 273 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm14408-202ENSMUST00000126726 279 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm25979-201ENSMUST00000157177 138 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm24060-201ENSMUST00000157494 95 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm25413-201ENSMUST00000158544 312 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm10177-202ENSMUST00000161698 207 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm7346-201ENSMUST00000169661 476 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm22307-201ENSMUST00000180019 107 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm26933-201ENSMUST00000182320 827 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm4842-201ENSMUST00000183237 835 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm27428-201ENSMUST00000184289 110 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm27805-201ENSMUST00000184513 79 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm27899-201ENSMUST00000184715 64 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Nkx2-1P50220 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm37438-201ENSMUST00000192813 393 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm43649-201ENSMUST00000196596 391 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Rnu3a-202ENSMUST00000196710 213 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm43407-201ENSMUST00000199816 317 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm18507-201ENSMUST00000218855 525 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 AC164567.4-201ENSMUST00000219708 483 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm6988-201ENSMUST00000222676 375 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 CT025689.2-201ENSMUST00000224979 429 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm26121-201ENSMUST00000083364 162 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Rnu3a-201ENSMUST00000083936 214 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Nkx2-1P50220 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Nkx2-1P50220 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Nkx2-1P50220 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.34□□□□□ -1.88
Nkx2-1P50220 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Nkx2-1P50220 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nkx2-1P50220 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms