Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm28785-201ENSMUST00000187478 379 ntBASIC3.22□□□□□ -1.89
TfamP40630 Gm34272-201ENSMUST00000208886 253 ntBASIC3.22□□□□□ -1.89
TfamP40630 Gm45814-201ENSMUST00000212646 775 ntBASIC3.22□□□□□ -1.89
TfamP40630 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.22□□□□□ -1.89
TfamP40630 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.22□□□□□ -1.89
TfamP40630 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.22□□□□□ -1.89
TfamP40630 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
TfamP40630 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TfamP40630 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TfamP40630 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TfamP40630 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TfamP40630 Mir132-201ENSMUST00000083603 66 ntBASIC3.22□□□□□ -1.89
TfamP40630 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TfamP40630 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TfamP40630 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TfamP40630 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.89
TfamP40630 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
TfamP40630 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TfamP40630 Gm24273-201ENSMUST00000102332 164 ntBASIC3.21□□□□□ -1.9
TfamP40630 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TfamP40630 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.21□□□□□ -1.9
TfamP40630 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
TfamP40630 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TfamP40630 Gm11488-201ENSMUST00000117277 863 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm12568-201ENSMUST00000117362 624 ntBASIC3.21□□□□□ -1.9
TfamP40630 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm12025-201ENSMUST00000117768 144 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm13379-201ENSMUST00000118053 621 ntBASIC3.21□□□□□ -1.9
TfamP40630 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm14253-201ENSMUST00000122112 639 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm15038-201ENSMUST00000122144 296 ntBASIC3.21□□□□□ -1.9
TfamP40630 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm10075-201ENSMUST00000162030 545 ntBASIC3.21□□□□□ -1.9
TfamP40630 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.21□□□□□ -1.9
TfamP40630 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.21□□□□□ -1.9
TfamP40630 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TfamP40630 Gm28191-201ENSMUST00000189112 211 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm37164-201ENSMUST00000192809 637 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.21□□□□□ -1.9
TfamP40630 Gm43239-201ENSMUST00000200131 201 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm34091-201ENSMUST00000200875 604 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.21□□□□□ -1.9
TfamP40630 Gm45778-201ENSMUST00000211959 153 ntBASIC3.21□□□□□ -1.9
TfamP40630 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm9628-201ENSMUST00000222169 725 ntBASIC3.21□□□□□ -1.9
TfamP40630 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.21□□□□□ -1.9
TfamP40630 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.21□□□□□ -1.9
TfamP40630 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
TfamP40630 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TfamP40630 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TfamP40630 Gm4987-201ENSMUST00000078326 408 ntBASIC3.21□□□□□ -1.9
TfamP40630 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TfamP40630 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
TfamP40630 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
TfamP40630 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TfamP40630 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TfamP40630 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
TfamP40630 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
TfamP40630 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.21□□□□□ -1.9
TfamP40630 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
TfamP40630 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TfamP40630 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TfamP40630 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TfamP40630 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TfamP40630 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm15195-201ENSMUST00000118775 263 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm23183-201ENSMUST00000122595 323 ntBASIC3.2□□□□□ -1.9
TfamP40630 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TfamP40630 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm22910-201ENSMUST00000178568 132 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm29064-201ENSMUST00000187014 813 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm29105-201ENSMUST00000187256 450 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.2□□□□□ -1.9
TfamP40630 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.2□□□□□ -1.9
TfamP40630 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm37428-201ENSMUST00000193886 137 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm29704-201ENSMUST00000196011 253 ntBASIC3.2□□□□□ -1.9
TfamP40630 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.2□□□□□ -1.9
TfamP40630 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm44266-201ENSMUST00000205235 500 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.2□□□□□ -1.9
TfamP40630 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm19219-201ENSMUST00000215863 724 ntBASIC3.2□□□□□ -1.9
TfamP40630 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.2□□□□□ -1.9
TfamP40630 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.2□□□□□ -1.9
TfamP40630 CT030254.3-201ENSMUST00000225959 1231 ntBASIC3.2□□□□□ -1.9
TfamP40630 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TfamP40630 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TfamP40630 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
TfamP40630 Gm10237-201ENSMUST00000078393 273 ntBASIC3.2□□□□□ -1.9
TfamP40630 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TfamP40630 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.2□□□□□ -1.9
TfamP40630 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.2□□□□□ -1.9
TfamP40630 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TfamP40630 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TfamP40630 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms