Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm13771-201ENSMUST00000117988 238 ntBASIC3.49□□□□□ -1.85
Col2a1P28481 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Col2a1P28481 Gm21893-201ENSMUST00000179119 397 ntBASIC3.49□□□□□ -1.85
Col2a1P28481 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC3.49□□□□□ -1.85
Col2a1P28481 Gm6140-201ENSMUST00000192494 966 ntBASIC3.49□□□□□ -1.85
Col2a1P28481 Gm32447-201ENSMUST00000194265 697 ntBASIC3.49□□□□□ -1.85
Col2a1P28481 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.49□□□□□ -1.85
Col2a1P28481 Gm26379-202ENSMUST00000200225 132 ntBASIC3.49□□□□□ -1.85
Col2a1P28481 Gm44526-201ENSMUST00000204664 121 ntBASIC3.49□□□□□ -1.85
Col2a1P28481 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC3.49□□□□□ -1.85
Col2a1P28481 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.49□□□□□ -1.85
Col2a1P28481 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.49□□□□□ -1.85
Col2a1P28481 AC132121.1-201ENSMUST00000220774 332 ntBASIC3.49□□□□□ -1.85
Col2a1P28481 AC123658.1-201ENSMUST00000228364 867 ntBASIC3.49□□□□□ -1.85
Col2a1P28481 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Col2a1P28481 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Col2a1P28481 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Col2a1P28481 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.49□□□□□ -1.85
Col2a1P28481 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col2a1P28481 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
Col2a1P28481 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Col2a1P28481 Mir680-3-201ENSMUST00000102298 87 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Gm8475-201ENSMUST00000118211 526 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Gm12723-201ENSMUST00000120700 451 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Gm7350-201ENSMUST00000120964 636 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col2a1P28481 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col2a1P28481 Gm22141-201ENSMUST00000157403 277 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col2a1P28481 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col2a1P28481 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Gm26933-201ENSMUST00000182320 827 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Gm29013-201ENSMUST00000187431 237 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Gm29148-201ENSMUST00000188140 336 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Gm38330-201ENSMUST00000192743 959 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Gm18921-201ENSMUST00000221798 366 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col2a1P28481 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col2a1P28481 Mir184-201ENSMUST00000083662 69 ntBASIC3.48□□□□□ -1.85
Col2a1P28481 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col2a1P28481 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col2a1P28481 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Col2a1P28481 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col2a1P28481 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col2a1P28481 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col2a1P28481 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col2a1P28481 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col2a1P28481 Gm25485-201ENSMUST00000104120 132 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm23911-201ENSMUST00000104596 134 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm12105-201ENSMUST00000120846 779 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Mup-ps15-201ENSMUST00000121741 539 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm14768-201ENSMUST00000122126 678 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm23902-201ENSMUST00000157571 134 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm27648-201ENSMUST00000184315 107 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm38334-201ENSMUST00000195060 313 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm42539-201ENSMUST00000197009 308 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm43521-201ENSMUST00000197838 255 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm43107-201ENSMUST00000198729 255 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 AC153522.1-201ENSMUST00000220047 1090 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.47□□□□□ -1.85
Col2a1P28481 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col2a1P28481 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col2a1P28481 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col2a1P28481 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Col2a1P28481 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Col2a1P28481 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col2a1P28481 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col2a1P28481 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm13009-201ENSMUST00000121307 267 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm26028-201ENSMUST00000158660 294 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm22664-201ENSMUST00000158719 105 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm26928-201ENSMUST00000182674 572 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm28438-201ENSMUST00000188299 345 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.47□□□□□ -1.85
Col2a1P28481 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.47□□□□□ -1.85
Col2a1P28481 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms