Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Mir599-201ENSMUST00000102378 88 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm23608-201ENSMUST00000104545 128 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm11429-201ENSMUST00000119089 144 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm15037-201ENSMUST00000120358 259 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm13574-201ENSMUST00000120482 394 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm15168-201ENSMUST00000121057 316 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm12685-201ENSMUST00000121702 214 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm15274-201ENSMUST00000131442 291 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm21979-201ENSMUST00000139887 291 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm15259-201ENSMUST00000151262 291 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm7346-201ENSMUST00000169661 476 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm17086-201ENSMUST00000171346 484 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC2.9□□□□□ -1.95
Sdc1P18828 V1rg10-201ENSMUST00000183378 937 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC2.9□□□□□ -1.95
Sdc1P18828 Npn2-202ENSMUST00000189275 235 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC2.9□□□□□ -1.95
Sdc1P18828 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm44137-201ENSMUST00000203670 367 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm44184-201ENSMUST00000204290 132 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.9□□□□□ -1.95
Sdc1P18828 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Sdc1P18828 AC157572.3-201ENSMUST00000227288 303 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm23850-201ENSMUST00000083830 169 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Sdc1P18828 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Sdc1P18828 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Sdc1P18828 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.9□□□□□ -1.95
Sdc1P18828 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC2.9□□□□□ -1.95
Sdc1P18828 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Mir693-201ENSMUST00000102187 89 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sdc1P18828 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Sdc1P18828 Mir291a-201ENSMUST00000104815 82 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm15151-201ENSMUST00000117106 177 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm14415-201ENSMUST00000118260 1578 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm16445-201ENSMUST00000120399 714 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC2.89□□□□□ -1.95
Sdc1P18828 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm29299-201ENSMUST00000185609 923 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm28304-201ENSMUST00000185977 312 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm6802-202ENSMUST00000186566 126 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm28439-201ENSMUST00000187714 876 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm29256-201ENSMUST00000189094 312 ntBASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sdc1P18828 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms