Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.06□□□□□ -1.92
Cdx1P18111 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Cdx1P18111 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Cdx1P18111 Gm19203-201ENSMUST00000174049 939 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm22693-201ENSMUST00000175049 442 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.06□□□□□ -1.92
Cdx1P18111 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cdx1P18111 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm24417-201ENSMUST00000178123 79 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm24653-201ENSMUST00000178541 79 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm25934-201ENSMUST00000178642 79 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Mir713-201ENSMUST00000178651 108 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.06□□□□□ -1.92
Cdx1P18111 Mir129b-201ENSMUST00000197461 65 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm43855-201ENSMUST00000197462 507 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm44849-201ENSMUST00000207595 484 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm44946-201ENSMUST00000208425 572 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 AC168059.1-201ENSMUST00000225846 841 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Cdx1P18111 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cdx1P18111 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cdx1P18111 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cdx1P18111 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cdx1P18111 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Cdx1P18111 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Cdx1P18111 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Cdx1P18111 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Cdx1P18111 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Cdx1P18111 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.06□□□□□ -1.92
Cdx1P18111 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Cdx1P18111 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.06□□□□□ -1.92
Cdx1P18111 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cdx1P18111 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Cdx1P18111 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cdx1P18111 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cdx1P18111 Gm6982-201ENSMUST00000118752 1560 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cdx1P18111 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Cdx1P18111 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cdx1P18111 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm5757-201ENSMUST00000117494 528 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm15364-201ENSMUST00000119618 585 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm11746-201ENSMUST00000119843 821 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm13471-201ENSMUST00000122057 433 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Cdx1P18111 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Cdx1P18111 Gm24850-201ENSMUST00000158029 119 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm26036-201ENSMUST00000158149 144 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Cdx1P18111 Mir5106-201ENSMUST00000174936 73 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm10292-201ENSMUST00000183142 581 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm37300-201ENSMUST00000193327 280 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.05□□□□□ -1.92
Cdx1P18111 Gm37523-201ENSMUST00000194901 412 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm37417-201ENSMUST00000195257 454 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm43853-201ENSMUST00000197162 301 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm44023-201ENSMUST00000203710 469 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC3.05□□□□□ -1.92
Cdx1P18111 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm45192-201ENSMUST00000206749 283 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm34272-201ENSMUST00000208886 253 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm45312-201ENSMUST00000210566 311 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm18903-201ENSMUST00000215343 480 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm34005-201ENSMUST00000215834 282 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm6841-201ENSMUST00000220602 598 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Mir132-201ENSMUST00000083603 66 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cdx1P18111 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cdx1P18111 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Cdx1P18111 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.05□□□□□ -1.92
Cdx1P18111 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Cdx1P18111 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
Cdx1P18111 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
Cdx1P18111 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.04□□□□□ -1.92
Cdx1P18111 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Cdx1P18111 Gm43178-201ENSMUST00000197257 1386 ntBASIC3.04□□□□□ -1.92
Cdx1P18111 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Cdx1P18111 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Cdx1P18111 Gm23271-201ENSMUST00000104052 124 ntBASIC3.04□□□□□ -1.92
Cdx1P18111 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.04□□□□□ -1.92
Cdx1P18111 Gm11253-201ENSMUST00000118486 201 ntBASIC3.04□□□□□ -1.92
Cdx1P18111 Gm15854-201ENSMUST00000118879 808 ntBASIC3.04□□□□□ -1.92
Cdx1P18111 Gm14687-201ENSMUST00000120206 363 ntBASIC3.04□□□□□ -1.92
Cdx1P18111 Gm22986-201ENSMUST00000122753 130 ntBASIC3.04□□□□□ -1.92
Cdx1P18111 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Cdx1P18111 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.04□□□□□ -1.92
Cdx1P18111 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.04□□□□□ -1.92
Cdx1P18111 Gm23123-201ENSMUST00000157648 144 ntBASIC3.04□□□□□ -1.92
Cdx1P18111 Gm24727-201ENSMUST00000158231 144 ntBASIC3.04□□□□□ -1.92
Cdx1P18111 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Cdx1P18111 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms