| Hoxa9 | P09631 | Gm37674-201 | ENSMUST00000194177 | 1834 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Igkv9-124-201 | ENSMUST00000103312 | 287 nt | APPRIS P1 BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm14973-201 | ENSMUST00000117248 | 255 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Olfr1235-ps1-201 | ENSMUST00000117898 | 314 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm9043-201 | ENSMUST00000119677 | 314 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm11483-201 | ENSMUST00000119839 | 247 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm13667-201 | ENSMUST00000132332 | 617 nt | TSL 5 BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | 4930421P07Rik-201 | ENSMUST00000147322 | 399 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm26045-201 | ENSMUST00000157862 | 97 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm2056-201 | ENSMUST00000178852 | 435 nt | APPRIS P1 BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm27315-201 | ENSMUST00000183977 | 154 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Mir6398-201 | ENSMUST00000184541 | 102 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Ighv1-28-201 | ENSMUST00000192987 | 351 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Traj57-202 | ENSMUST00000196977 | 63 nt | APPRIS P1 BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm42625-201 | ENSMUST00000198611 | 922 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm44927-201 | ENSMUST00000207573 | 716 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm5175-202 | ENSMUST00000219699 | 529 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm38560-201 | ENSMUST00000220169 | 646 nt | TSL 3 BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Olfr513-201 | ENSMUST00000055146 | 930 nt | APPRIS P1 BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm4987-201 | ENSMUST00000078326 | 408 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm10237-201 | ENSMUST00000078393 | 273 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Snord35b-201 | ENSMUST00000082833 | 87 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm23297-201 | ENSMUST00000083184 | 127 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Fbxw21-201 | ENSMUST00000054925 | 1512 nt | APPRIS P2 TSL 1 (best) BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Erbin-205 | ENSMUST00000188997 | 5084 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm3239-201 | ENSMUST00000163525 | 1751 nt | APPRIS P5 TSL 5 BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | AC104897.1-201 | ENSMUST00000222638 | 3628 nt | BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Olfr134-202 | ENSMUST00000215900 | 1670 nt | APPRIS P1 TSL 5 BASIC | 3.52 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Cbll1-201 | ENSMUST00000064240 | 3937 nt | APPRIS ALT1 TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | AC153365.1-201 | ENSMUST00000219016 | 2031 nt | TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm45540-201 | ENSMUST00000209271 | 3606 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm14811-201 | ENSMUST00000117070 | 117 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm13873-201 | ENSMUST00000119208 | 427 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm8289-201 | ENSMUST00000144814 | 1182 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | 4930503B20Rik-203 | ENSMUST00000149825 | 970 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm4725-201 | ENSMUST00000151048 | 587 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | A630050E04Rik-201 | ENSMUST00000151443 | 581 nt | TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm25066-201 | ENSMUST00000158145 | 123 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm16101-201 | ENSMUST00000160695 | 430 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Ear-ps12-201 | ENSMUST00000161720 | 451 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Vmn2r-ps67-201 | ENSMUST00000172624 | 385 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | A330048O09Rik-201 | ENSMUST00000180777 | 672 nt | TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm3454-201 | ENSMUST00000185571 | 412 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm6947-201 | ENSMUST00000186254 | 78 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | 1700006P03Rik-201 | ENSMUST00000191810 | 409 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm37319-201 | ENSMUST00000193500 | 636 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm36974-201 | ENSMUST00000194200 | 1071 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Trdv3-201 | ENSMUST00000198551 | 309 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm43198-201 | ENSMUST00000200927 | 326 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Vmn1r-ps6-201 | ENSMUST00000201079 | 934 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | A530053G22Rik-204 | ENSMUST00000204579 | 536 nt | TSL 2 BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm18423-201 | ENSMUST00000205144 | 1074 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Irf2-209 | ENSMUST00000210218 | 535 nt | TSL 3 BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm8423-201 | ENSMUST00000211387 | 607 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Olfr852-ps1-201 | ENSMUST00000212273 | 226 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Olfr652-202 | ENSMUST00000215410 | 4672 nt | APPRIS P1 TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm32283-201 | ENSMUST00000218861 | 549 nt | TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | AC113204.1-202 | ENSMUST00000219846 | 578 nt | TSL 3 BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | AC155929.1-201 | ENSMUST00000220217 | 1276 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Olfr1204-201 | ENSMUST00000078631 | 930 nt | APPRIS P1 BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Snora70-201 | ENSMUST00000083047 | 137 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | AF357341-201 | ENSMUST00000083088 | 75 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Evi2b-201 | ENSMUST00000179322 | 1858 nt | APPRIS P1 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm29221-201 | ENSMUST00000186092 | 2894 nt | TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Uty-208 | ENSMUST00000154004 | 4267 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm44164-201 | ENSMUST00000203605 | 2561 nt | BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm12845-201 | ENSMUST00000203629 | 1767 nt | APPRIS P5 TSL 5 BASIC | 3.51 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Prl7d1-203 | ENSMUST00000224026 | 3657 nt | APPRIS P2 BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm15679-201 | ENSMUST00000161244 | 1936 nt | TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Olfr469-202 | ENSMUST00000213252 | 3164 nt | APPRIS P1 TSL 5 BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Wfdc18-201 | ENSMUST00000001009 | 521 nt | APPRIS P1 TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Hspb11-202 | ENSMUST00000106749 | 607 nt | APPRIS P1 TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm12722-201 | ENSMUST00000118507 | 493 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm16471-201 | ENSMUST00000121940 | 618 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm14768-201 | ENSMUST00000122126 | 678 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm12958-201 | ENSMUST00000141242 | 674 nt | TSL 3 BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm12505-201 | ENSMUST00000146041 | 757 nt | TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm15200-201 | ENSMUST00000149950 | 410 nt | TSL 2 BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Vmn2r-ps75-201 | ENSMUST00000173251 | 213 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Ang-ps3-201 | ENSMUST00000177964 | 433 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | 2900009J06Rik-201 | ENSMUST00000185310 | 498 nt | TSL 2 BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | 1700023F02Rik-203 | ENSMUST00000189619 | 473 nt | TSL 3 BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | 4930590L20Rik-201 | ENSMUST00000193820 | 553 nt | TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Igkv13-80-1-201 | ENSMUST00000197926 | 255 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Tas2r146-ps1-201 | ENSMUST00000203065 | 934 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | E330011O21Rik-203 | ENSMUST00000210555 | 455 nt | TSL 5 BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm34005-201 | ENSMUST00000215834 | 282 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | AC174797.3-202 | ENSMUST00000224578 | 587 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | CT030254.3-201 | ENSMUST00000225959 | 1231 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Lelp1-201 | ENSMUST00000029535 | 857 nt | APPRIS P1 TSL 1 (best) BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm37204-201 | ENSMUST00000192389 | 3961 nt | BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Strbp-201 | ENSMUST00000028279 | 16348 nt | APPRIS P1 TSL 5 BASIC | 3.5 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Olfr364-ps1-203 | ENSMUST00000217298 | 2894 nt | APPRIS P1 TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Zmym2-201 | ENSMUST00000022511 | 6974 nt | APPRIS P1 TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Pik3ca-201 | ENSMUST00000029201 | 8917 nt | APPRIS P1 TSL 1 (best) BASIC | 3.49 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Olfr502-202 | ENSMUST00000216919 | 3282 nt | APPRIS P1 TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm11110-201 | ENSMUST00000112915 | 1013 nt | APPRIS P1 TSL 5 BASIC | 3.49 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm14681-201 | ENSMUST00000118047 | 411 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm12448-201 | ENSMUST00000118852 | 655 nt | BASIC | 3.49 | □□□□□ -1.85 | | |
| Hoxa9 | P09631 | Gm14570-201 | ENSMUST00000119444 | 391 nt | BASIC | 3.49 | □□□□□ -1.85 | | |