Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC5.08□□□□□ -1.6
NefmP08553 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC5.08□□□□□ -1.6
NefmP08553 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NefmP08553 Gm37290-201ENSMUST00000195775 339 ntBASIC5.08□□□□□ -1.6
NefmP08553 Gm18340-201ENSMUST00000196342 609 ntBASIC5.08□□□□□ -1.6
NefmP08553 Gm7034-201ENSMUST00000218638 645 ntBASIC5.08□□□□□ -1.6
NefmP08553 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NefmP08553 Gm9818-201ENSMUST00000050900 255 ntBASIC5.08□□□□□ -1.6
NefmP08553 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NefmP08553 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NefmP08553 Gm24611-201ENSMUST00000083272 107 ntBASIC5.08□□□□□ -1.6
NefmP08553 Gm26165-201ENSMUST00000083791 138 ntBASIC5.08□□□□□ -1.6
NefmP08553 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
NefmP08553 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.07□□□□□ -1.6
NefmP08553 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NefmP08553 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NefmP08553 Gm5757-201ENSMUST00000117494 528 ntBASIC5.07□□□□□ -1.6
NefmP08553 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.07□□□□□ -1.6
NefmP08553 Gm22480-201ENSMUST00000122568 128 ntBASIC5.07□□□□□ -1.6
NefmP08553 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NefmP08553 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC5.07□□□□□ -1.6
NefmP08553 Gm22789-201ENSMUST00000157884 130 ntBASIC5.07□□□□□ -1.6
NefmP08553 Gm24875-201ENSMUST00000158888 104 ntBASIC5.07□□□□□ -1.6
NefmP08553 Gm9587-201ENSMUST00000172449 454 ntBASIC5.07□□□□□ -1.6
NefmP08553 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC5.07□□□□□ -1.6
NefmP08553 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NefmP08553 Mir6926-201ENSMUST00000184562 68 ntBASIC5.07□□□□□ -1.6
NefmP08553 Gm28148-201ENSMUST00000186924 697 ntBASIC5.07□□□□□ -1.6
NefmP08553 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC5.07□□□□□ -1.6
NefmP08553 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
NefmP08553 Gm37098-201ENSMUST00000192290 244 ntBASIC5.07□□□□□ -1.6
NefmP08553 Gm7449-201ENSMUST00000194393 663 ntBASIC5.07□□□□□ -1.6
NefmP08553 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC5.07□□□□□ -1.6
NefmP08553 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NefmP08553 Gm45796-201ENSMUST00000212483 114 ntBASIC5.07□□□□□ -1.6
NefmP08553 AC099578.1-201ENSMUST00000220147 435 ntBASIC5.07□□□□□ -1.6
NefmP08553 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NefmP08553 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NefmP08553 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NefmP08553 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NefmP08553 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NefmP08553 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NefmP08553 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.07□□□□□ -1.6
NefmP08553 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NefmP08553 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC5.06□□□□□ -1.6
NefmP08553 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.06□□□□□ -1.6
NefmP08553 Gm11913-201ENSMUST00000119094 336 ntBASIC5.06□□□□□ -1.6
NefmP08553 Gm11876-201ENSMUST00000120002 269 ntBASIC5.06□□□□□ -1.6
NefmP08553 Gm15014-201ENSMUST00000120742 258 ntBASIC5.06□□□□□ -1.6
NefmP08553 Gm24592-201ENSMUST00000122505 106 ntBASIC5.06□□□□□ -1.6
NefmP08553 Gm26487-201ENSMUST00000158022 94 ntBASIC5.06□□□□□ -1.6
NefmP08553 Gm19898-201ENSMUST00000177490 251 ntBASIC5.06□□□□□ -1.6
NefmP08553 Gm17937-201ENSMUST00000197908 742 ntBASIC5.06□□□□□ -1.6
NefmP08553 AC151843.1-201ENSMUST00000215960 691 ntBASIC5.06□□□□□ -1.6
NefmP08553 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC5.06□□□□□ -1.6
NefmP08553 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC5.06□□□□□ -1.6
NefmP08553 AC126043.1-201ENSMUST00000221304 1141 ntBASIC5.06□□□□□ -1.6
NefmP08553 AC134254.4-201ENSMUST00000223086 370 ntBASIC5.06□□□□□ -1.6
NefmP08553 AC192088.2-201ENSMUST00000227590 411 ntBASIC5.06□□□□□ -1.6
NefmP08553 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NefmP08553 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NefmP08553 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC5.06□□□□□ -1.6
NefmP08553 Gm26121-201ENSMUST00000083364 162 ntBASIC5.06□□□□□ -1.6
NefmP08553 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NefmP08553 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NefmP08553 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NefmP08553 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
NefmP08553 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NefmP08553 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NefmP08553 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
NefmP08553 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NefmP08553 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
NefmP08553 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.05□□□□□ -1.6
NefmP08553 Gm23098-201ENSMUST00000157552 299 ntBASIC5.05□□□□□ -1.6
NefmP08553 Gm16563-201ENSMUST00000162673 423 ntBASIC5.05□□□□□ -1.6
NefmP08553 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC5.05□□□□□ -1.6
NefmP08553 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC5.05□□□□□ -1.6
NefmP08553 Gm38329-201ENSMUST00000193473 427 ntBASIC5.05□□□□□ -1.6
NefmP08553 Gm42454-201ENSMUST00000196805 1181 ntBASIC5.05□□□□□ -1.6
NefmP08553 Gm19243-201ENSMUST00000198592 269 ntBASIC5.05□□□□□ -1.6
NefmP08553 Gm42796-201ENSMUST00000199913 1087 ntBASIC5.05□□□□□ -1.6
NefmP08553 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC5.05□□□□□ -1.6
NefmP08553 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC5.05□□□□□ -1.6
NefmP08553 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NefmP08553 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.05□□□□□ -1.6
NefmP08553 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NefmP08553 AC124549.2-201ENSMUST00000224243 222 ntBASIC5.05□□□□□ -1.6
NefmP08553 CT485608.1-201ENSMUST00000228759 389 ntBASIC5.05□□□□□ -1.6
NefmP08553 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NefmP08553 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NefmP08553 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NefmP08553 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NefmP08553 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
NefmP08553 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC5.05□□□□□ -1.6
NefmP08553 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NefmP08553 Gm45540-201ENSMUST00000209271 3606 ntBASIC5.05□□□□□ -1.6
NefmP08553 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC5.05□□□□□ -1.6
NefmP08553 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.05□□□□□ -1.6
NefmP08553 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC5.05□□□□□ -1.6
NefmP08553 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms