Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm18194-201ENSMUST00000210455 481 ntBASIC4.18□□□□□ -1.74
Lmx1bO88609 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Lmx1bO88609 n-R5s94-201ENSMUST00000082573 119 ntBASIC4.18□□□□□ -1.74
Lmx1bO88609 Gm24622-201ENSMUST00000082619 162 ntBASIC4.18□□□□□ -1.74
Lmx1bO88609 Gm6177-201ENSMUST00000085589 465 ntBASIC4.18□□□□□ -1.74
Lmx1bO88609 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Lmx1bO88609 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Lmx1bO88609 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC4.18□□□□□ -1.74
Lmx1bO88609 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.18□□□□□ -1.74
Lmx1bO88609 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lmx1bO88609 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Lmx1bO88609 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Lmx1bO88609 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Lmx1bO88609 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Lmx1bO88609 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lmx1bO88609 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Lmx1bO88609 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
Lmx1bO88609 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Lmx1bO88609 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lmx1bO88609 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.18□□□□□ -1.74
Lmx1bO88609 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
Lmx1bO88609 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
Lmx1bO88609 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm14292-201ENSMUST00000118761 456 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm14688-201ENSMUST00000119169 303 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm13627-201ENSMUST00000119700 706 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm2020-201ENSMUST00000145242 579 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm22765-201ENSMUST00000158371 128 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm15796-201ENSMUST00000162135 204 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm6486-201ENSMUST00000166202 434 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Lmx1bO88609 Mir6401-201ENSMUST00000184499 109 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Lmx1bO88609 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Lmx1bO88609 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm37836-201ENSMUST00000195875 175 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm45048-201ENSMUST00000207058 429 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm2676-201ENSMUST00000207279 606 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm45439-201ENSMUST00000211723 359 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm3338-201ENSMUST00000220982 269 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Lmx1bO88609 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Lmx1bO88609 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.17□□□□□ -1.74
Lmx1bO88609 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Lmx1bO88609 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Lmx1bO88609 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Lmx1bO88609 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm14731-201ENSMUST00000119216 376 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm12515-201ENSMUST00000120116 361 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm13368-201ENSMUST00000122443 430 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm17421-201ENSMUST00000167845 674 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm24418-201ENSMUST00000177597 79 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm24639-201ENSMUST00000178518 79 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm23076-201ENSMUST00000179082 79 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm25077-201ENSMUST00000179157 79 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm27013-201ENSMUST00000182441 1024 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Mir6975-201ENSMUST00000184879 61 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.16□□□□□ -1.74
Lmx1bO88609 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.16□□□□□ -1.74
Lmx1bO88609 Gm29484-201ENSMUST00000186067 324 ntBASIC4.16□□□□□ -1.74
Lmx1bO88609 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms