Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm44355-201ENSMUST00000200417 104 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Gm20039-201ENSMUST00000210329 394 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Gm18899-201ENSMUST00000217663 546 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Gm18120-201ENSMUST00000220079 511 ntBASIC2.58□□□□□ -2
Hmgb3O54879 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.58□□□□□ -2
Hmgb3O54879 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.58□□□□□ -2
Hmgb3O54879 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hmgb3O54879 Gm26064-201ENSMUST00000083381 109 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Gm26165-201ENSMUST00000083791 138 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.58□□□□□ -2
Hmgb3O54879 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hmgb3O54879 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.58□□□□□ -2
Hmgb3O54879 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC2.58□□□□□ -2
Hmgb3O54879 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Hmgb3O54879 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
Hmgb3O54879 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Hmgb3O54879 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hmgb3O54879 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hmgb3O54879 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC2.57□□□□□ -2
Hmgb3O54879 Gm11488-201ENSMUST00000117277 863 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm12149-201ENSMUST00000117511 654 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC2.57□□□□□ -2
Hmgb3O54879 Gm27592-201ENSMUST00000157729 126 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm25603-201ENSMUST00000158361 105 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm22840-201ENSMUST00000158444 136 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm22174-201ENSMUST00000175050 125 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm22692-201ENSMUST00000175055 125 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm27634-201ENSMUST00000175060 126 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm22460-201ENSMUST00000175269 124 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm25535-201ENSMUST00000175364 125 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm24365-201ENSMUST00000175384 125 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm44310-201ENSMUST00000175424 126 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm22639-201ENSMUST00000175591 125 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm24979-201ENSMUST00000178626 126 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Mir6413-201ENSMUST00000184049 108 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm27163-201ENSMUST00000184767 409 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm27743-201ENSMUST00000185136 126 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC2.57□□□□□ -2
Hmgb3O54879 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.57□□□□□ -2
Hmgb3O54879 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC2.57□□□□□ -2
Hmgb3O54879 Gm37418-201ENSMUST00000195031 274 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm43521-201ENSMUST00000197838 255 ntBASIC2.57□□□□□ -2
Hmgb3O54879 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm43107-201ENSMUST00000198729 255 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC2.57□□□□□ -2
Hmgb3O54879 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
Hmgb3O54879 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC2.57□□□□□ -2
Hmgb3O54879 AL772397.1-201ENSMUST00000216707 606 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm17872-201ENSMUST00000222550 532 ntBASIC2.57□□□□□ -2
Hmgb3O54879 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.57□□□□□ -2
Hmgb3O54879 AC158392.2-201ENSMUST00000225402 969 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.57□□□□□ -2
Hmgb3O54879 AC130547.1-201ENSMUST00000228079 1047 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hmgb3O54879 Gm7204-201ENSMUST00000062591 600 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hmgb3O54879 Gm4987-201ENSMUST00000078326 408 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm22739-201ENSMUST00000083437 160 ntBASIC2.57□□□□□ -2
Hmgb3O54879 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hmgb3O54879 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.57□□□□□ -2
Hmgb3O54879 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Hmgb3O54879 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
Hmgb3O54879 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hmgb3O54879 Gm6545-201ENSMUST00000217186 1786 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Hmgb3O54879 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hmgb3O54879 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Hmgb3O54879 Gm9009-201ENSMUST00000117321 326 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Gm9157-201ENSMUST00000117673 225 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Gm14971-201ENSMUST00000117980 663 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hmgb3O54879 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
Hmgb3O54879 Gm25341-201ENSMUST00000157461 268 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Gm24289-201ENSMUST00000157629 135 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Mir3090-201ENSMUST00000175597 87 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Gm27796-201ENSMUST00000183863 261 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.56□□□□□ -2
Hmgb3O54879 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC2.56□□□□□ -2
Hmgb3O54879 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC2.56□□□□□ -2
Hmgb3O54879 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC2.56□□□□□ -2
Hmgb3O54879 AC108416.2-201ENSMUST00000226792 367 ntBASIC2.56□□□□□ -2
Hmgb3O54879 AC165437.1-201ENSMUST00000228640 536 ntBASIC2.56□□□□□ -2
Hmgb3O54879 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.56□□□□□ -2
Hmgb3O54879 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Hmgb3O54879 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Hmgb3O54879 Snord35b-201ENSMUST00000082833 87 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hmgb3O54879 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hmgb3O54879 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hmgb3O54879 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC2.56□□□□□ -2
Hmgb3O54879 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hmgb3O54879 Gm8734-201ENSMUST00000211669 1312 ntBASIC2.56□□□□□ -2
Hmgb3O54879 AC131068.3-201ENSMUST00000228438 1456 ntBASIC2.56□□□□□ -2
Hmgb3O54879 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms