Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm9655-201ENSMUST00000211321 1284 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 AC118733.1-201ENSMUST00000217387 1217 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 AC154484.1-201ENSMUST00000227311 771 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm24035-201ENSMUST00000082867 107 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm25404-201ENSMUST00000082970 107 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 AC142245.1-201ENSMUST00000226611 1505 ntBASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Trav13d-3J3QMG8 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm7171-201ENSMUST00000177413 1349 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm13664-201ENSMUST00000117304 345 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm13268-201ENSMUST00000117485 433 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm15025-201ENSMUST00000118434 418 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm9078-201ENSMUST00000119126 617 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm11407-201ENSMUST00000120362 1058 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm6565-201ENSMUST00000121217 438 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm15878-201ENSMUST00000127561 306 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm23505-201ENSMUST00000158989 130 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm16588-201ENSMUST00000162889 355 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm25037-201ENSMUST00000175418 110 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Mir3112-201ENSMUST00000175431 82 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm27695-201ENSMUST00000184301 91 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm27952-201ENSMUST00000184748 105 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm28471-201ENSMUST00000185994 615 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm28598-201ENSMUST00000186490 615 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm28847-201ENSMUST00000186778 700 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm29268-201ENSMUST00000188669 615 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm5368-201ENSMUST00000189012 589 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm29365-201ENSMUST00000189461 699 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm29218-205ENSMUST00000190846 615 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm28978-201ENSMUST00000191120 615 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm37172-201ENSMUST00000191926 615 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm37979-201ENSMUST00000193065 712 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm44354-201ENSMUST00000196017 143 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm42850-201ENSMUST00000202094 201 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm22423-201ENSMUST00000082861 184 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm6361-201ENSMUST00000091031 435 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trav13d-3J3QMG8 BC051076-202ENSMUST00000199477 2868 ntBASIC3.53□□□□□ -1.85
Trav13d-3J3QMG8 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm24120-201ENSMUST00000103978 129 ntBASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm23948-201ENSMUST00000104030 132 ntBASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm15312-201ENSMUST00000118827 271 ntBASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm12543-201ENSMUST00000120410 543 ntBASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm2005-201ENSMUST00000120759 542 ntBASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm15309-201ENSMUST00000121644 240 ntBASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm25104-201ENSMUST00000122476 163 ntBASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm25874-201ENSMUST00000178030 79 ntBASIC3.52□□□□□ -1.85
Trav13d-3J3QMG8 Gm14527-201ENSMUST00000179300 639 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms