Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Acox3-201ENSMUST00000068563 3386 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Prpf6-201ENSMUST00000002529 3054 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gigyf2-205ENSMUST00000172794 4029 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm21955-201ENSMUST00000194137 4968 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Mir20b-201ENSMUST00000102087 80 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Mir717-201ENSMUST00000102259 109 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm23750-201ENSMUST00000104222 132 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm23905-201ENSMUST00000157568 109 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm24782-201ENSMUST00000157641 132 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm22789-201ENSMUST00000157884 130 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm23036-201ENSMUST00000157885 99 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Snord2-201ENSMUST00000157899 69 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm25862-201ENSMUST00000158250 129 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm26169-201ENSMUST00000158420 135 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm23117-201ENSMUST00000158482 108 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Scarna6-201ENSMUST00000158656 265 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm4152-201ENSMUST00000172675 259 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm22192-201ENSMUST00000175128 85 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm24086-201ENSMUST00000175171 98 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm22642-201ENSMUST00000175352 252 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm23017-201ENSMUST00000177583 72 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm27379-201ENSMUST00000183730 123 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Mir7235-201ENSMUST00000183796 56 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm27458-201ENSMUST00000185108 121 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm29383-201ENSMUST00000188284 480 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm9652-201ENSMUST00000209345 163 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm45674-201ENSMUST00000210043 450 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 AC134607.2-201ENSMUST00000213983 231 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 AC163041.1-201ENSMUST00000221984 133 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 AC162183.1-201ENSMUST00000224843 472 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 AC117949.1-201ENSMUST00000225547 419 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm23240-201ENSMUST00000083009 121 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 n-R5s41-201ENSMUST00000083025 119 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm25632-201ENSMUST00000083112 85 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm26244-201ENSMUST00000083435 164 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm24698-201ENSMUST00000083883 130 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Mir455-201ENSMUST00000093594 82 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Cntn4-205ENSMUST00000113261 2904 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm37613-201ENSMUST00000195677 3580 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Atg13-202ENSMUST00000076803 3551 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Gm37233-201ENSMUST00000192173 6263 ntBASIC1.06□□□□□ -2.24
Gm4559A4IF42 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Gm4559A4IF42 Abca8a-202ENSMUST00000100287 5619 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms