Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 AC174780.1-201ENSMUST00000199415 1107 ntBASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Gm44727-201ENSMUST00000204225 451 ntBASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Gm18410-201ENSMUST00000207199 577 ntBASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
H2afb1S4R1E0 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.54□□□□□ -1.84
H2afb1S4R1E0 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
H2afb1S4R1E0 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm13731-201ENSMUST00000117332 196 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm6797-201ENSMUST00000119440 512 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm14238-201ENSMUST00000120227 323 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm16060-201ENSMUST00000153140 478 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm22794-201ENSMUST00000157228 306 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm23753-201ENSMUST00000157575 149 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm25413-201ENSMUST00000158544 312 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm38270-201ENSMUST00000192721 407 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm42958-201ENSMUST00000197595 318 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm4045-201ENSMUST00000204076 310 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm44050-201ENSMUST00000204263 527 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 AC154241.1-201ENSMUST00000223952 356 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 AC132112.1-201ENSMUST00000226354 505 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 AC137902.2-201ENSMUST00000227989 576 ntBASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
H2afb1S4R1E0 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
H2afb1S4R1E0 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.53□□□□□ -1.85
H2afb1S4R1E0 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm15560-201ENSMUST00000117107 643 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm11876-201ENSMUST00000120002 269 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm15075-201ENSMUST00000122187 477 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm25603-201ENSMUST00000158361 105 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm23824-201ENSMUST00000158741 276 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm3102-201ENSMUST00000164236 489 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm17154-201ENSMUST00000165748 431 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm17064-201ENSMUST00000167690 452 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm22776-201ENSMUST00000178634 94 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm23767-201ENSMUST00000179278 94 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm25942-201ENSMUST00000180080 110 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm37088-201ENSMUST00000193887 406 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm37418-201ENSMUST00000195031 274 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm43704-201ENSMUST00000196164 496 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.52□□□□□ -1.85
H2afb1S4R1E0 Gm43424-201ENSMUST00000200484 253 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms