Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm22952-201ENSMUST00000116720 120 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm15002-201ENSMUST00000118406 452 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm7931-201ENSMUST00000121537 271 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm24481-201ENSMUST00000157210 102 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm25278-201ENSMUST00000157267 120 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm22548-201ENSMUST00000174899 78 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm22118-201ENSMUST00000175593 171 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm27851-201ENSMUST00000183529 63 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm27409-201ENSMUST00000184727 80 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm43250-201ENSMUST00000196536 273 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm43529-201ENSMUST00000199178 412 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm5027-201ENSMUST00000206700 375 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm44960-201ENSMUST00000207403 141 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 AC158805.1-201ENSMUST00000218197 2631 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nubp1Q9R060 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.55□□□□□ -1.52
Nubp1Q9R060 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm3584-201ENSMUST00000173822 2565 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm24121-201ENSMUST00000102029 106 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm11976-201ENSMUST00000119236 295 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm22599-201ENSMUST00000157597 132 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm25834-201ENSMUST00000158916 101 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm2962-201ENSMUST00000159266 336 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Mir5107-201ENSMUST00000175586 88 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm18956-201ENSMUST00000192857 480 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm37380-201ENSMUST00000193752 397 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm45750-201ENSMUST00000211966 354 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 AC145736.2-201ENSMUST00000216305 365 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Nubp1Q9R060 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.54□□□□□ -1.52
Nubp1Q9R060 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm18852-201ENSMUST00000184149 3593 ntBASIC5.53□□□□□ -1.52
Nubp1Q9R060 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nubp1Q9R060 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms