Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm22692-201ENSMUST00000175055 125 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm27634-201ENSMUST00000175060 126 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm26460-201ENSMUST00000175061 126 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm22460-201ENSMUST00000175269 124 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm25535-201ENSMUST00000175364 125 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm24365-201ENSMUST00000175384 125 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm44310-201ENSMUST00000175424 126 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm22639-201ENSMUST00000175591 125 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm24979-201ENSMUST00000178626 126 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm26915-201ENSMUST00000183080 748 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm27538-201ENSMUST00000185065 294 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm27743-201ENSMUST00000185136 126 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm6510-201ENSMUST00000195916 574 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm5552-201ENSMUST00000197149 515 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm42593-201ENSMUST00000198469 377 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm6590-201ENSMUST00000203343 687 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm43930-201ENSMUST00000203868 845 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm44294-201ENSMUST00000205090 728 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm8249-201ENSMUST00000219225 465 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm5175-202ENSMUST00000219699 529 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm8274-201ENSMUST00000219820 463 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm3565-201ENSMUST00000222670 609 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm22304-201ENSMUST00000082688 129 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.36□□□□□ -1.87
Upk3aQ9JKX8 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm24096-201ENSMUST00000103905 110 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm11488-201ENSMUST00000117277 863 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm14142-201ENSMUST00000117833 296 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm14591-201ENSMUST00000120407 518 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm6079-201ENSMUST00000121356 404 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm28030-201ENSMUST00000184987 138 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm29513-201ENSMUST00000185741 202 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm37097-201ENSMUST00000193676 336 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm45245-201ENSMUST00000210082 376 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm18645-202ENSMUST00000212222 760 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm35405-201ENSMUST00000218754 400 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 AC160970.1-201ENSMUST00000219311 475 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm4052-201ENSMUST00000220890 451 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Platr25-208ENSMUST00000222602 939 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm25800-201ENSMUST00000082636 134 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Mir101b-201ENSMUST00000083622 97 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm22868-201ENSMUST00000083955 164 ntBASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Upk3aQ9JKX8 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm25727-201ENSMUST00000104522 131 ntBASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm12118-201ENSMUST00000119766 532 ntBASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm24734-201ENSMUST00000158860 262 ntBASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm16147-201ENSMUST00000162143 373 ntBASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm2092-201ENSMUST00000178887 639 ntBASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm2759-201ENSMUST00000179938 639 ntBASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Upk3aQ9JKX8 Gm28788-201ENSMUST00000189717 375 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms