Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm7870-201ENSMUST00000184467 616 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm28655-201ENSMUST00000191538 692 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm8745-201ENSMUST00000207846 782 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm44946-201ENSMUST00000208425 572 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm45553-201ENSMUST00000209929 507 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm35262-201ENSMUST00000215133 267 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm3086-202ENSMUST00000221248 310 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 CR974485.1-201ENSMUST00000222408 402 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm12582-201ENSMUST00000030555 697 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm23677-201ENSMUST00000083156 104 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nkx2-4Q9EQM3 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm25272-201ENSMUST00000104293 128 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm25376-201ENSMUST00000104340 133 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm14981-201ENSMUST00000117325 943 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm11834-201ENSMUST00000122257 585 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Mup-ps2-201ENSMUST00000142602 533 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm28597-201ENSMUST00000187664 666 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm29950-201ENSMUST00000195273 237 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm31230-201ENSMUST00000199725 785 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm44990-201ENSMUST00000203922 217 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm45245-201ENSMUST00000210082 376 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 AC147639.2-202ENSMUST00000224834 1545 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.29□□□□□ -1.72
Nkx2-4Q9EQM3 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm22936-201ENSMUST00000103955 126 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm15176-201ENSMUST00000117734 135 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Mir3058-201ENSMUST00000175126 91 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm25535-201ENSMUST00000175364 125 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Mir6401-201ENSMUST00000184499 109 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm27249-201ENSMUST00000185049 328 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm42805-201ENSMUST00000196158 276 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm43276-201ENSMUST00000199712 364 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm45063-201ENSMUST00000203726 472 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm18644-201ENSMUST00000211458 815 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm45530-201ENSMUST00000211658 225 ntBASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC4.28□□□□□ -1.72
Nkx2-4Q9EQM3 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms