Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm12494-201ENSMUST00000121684 521 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm23411-201ENSMUST00000157988 62 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm17162-201ENSMUST00000168538 473 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm17907-201ENSMUST00000173150 710 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Mir3058-201ENSMUST00000175126 91 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Mir6401-201ENSMUST00000184499 109 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm18177-201ENSMUST00000188373 404 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm18964-201ENSMUST00000193013 563 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm44817-201ENSMUST00000205416 453 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm44811-201ENSMUST00000209120 228 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm45879-201ENSMUST00000212521 392 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 CT010455.1-201ENSMUST00000218579 413 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm21937-201ENSMUST00000222825 218 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC5.41□□□□□ -1.54
Trim42Q9D2H5 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 AC144819.1-201ENSMUST00000227015 620 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm25008-201ENSMUST00000083809 81 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 AC164297.1-201ENSMUST00000224484 1561 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.41□□□□□ -1.54
Trim42Q9D2H5 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Snora35-201ENSMUST00000104579 128 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm14792-201ENSMUST00000119725 258 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm14049-201ENSMUST00000121009 636 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm8761-201ENSMUST00000121507 955 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm11229-201ENSMUST00000121993 437 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Mir1900-201ENSMUST00000122714 78 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm24692-201ENSMUST00000157761 146 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm26041-201ENSMUST00000158148 108 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm26354-201ENSMUST00000158221 129 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm23704-201ENSMUST00000158844 340 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Ear-ps4-201ENSMUST00000166834 450 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm24819-201ENSMUST00000175094 166 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Mup-ps11-201ENSMUST00000178040 545 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Mup-ps3-201ENSMUST00000178315 545 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm29397-201ENSMUST00000185205 333 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm5058-201ENSMUST00000187331 463 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm7871-201ENSMUST00000195346 618 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Igkv15-102-201ENSMUST00000197885 287 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm43233-201ENSMUST00000200491 616 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm18791-201ENSMUST00000204611 726 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm45730-201ENSMUST00000212560 395 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Gm24410-201ENSMUST00000083433 107 ntBASIC5.4□□□□□ -1.54
Trim42Q9D2H5 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim42Q9D2H5 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim42Q9D2H5 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.4□□□□□ -1.55
Trim42Q9D2H5 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim42Q9D2H5 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim42Q9D2H5 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim42Q9D2H5 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm15526-201ENSMUST00000112504 204 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm13046-201ENSMUST00000117391 501 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm25150-201ENSMUST00000157121 60 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm24858-201ENSMUST00000158058 323 ntBASIC5.39□□□□□ -1.55
Trim42Q9D2H5 Gm7953-201ENSMUST00000168278 469 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms