Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Mir669i-201ENSMUST00000117007 127 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm12112-201ENSMUST00000117772 231 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm14512-201ENSMUST00000117924 230 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm14681-201ENSMUST00000118047 411 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm16125-201ENSMUST00000159003 339 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm24757-201ENSMUST00000176987 371 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm8532-201ENSMUST00000179174 461 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Mir6338-201ENSMUST00000183389 109 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm28339-201ENSMUST00000185845 696 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm29062-201ENSMUST00000186032 694 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm28057-201ENSMUST00000186603 615 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm28615-201ENSMUST00000187527 482 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm28896-201ENSMUST00000188609 696 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm29489-201ENSMUST00000188934 324 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm28061-201ENSMUST00000189085 807 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm29330-201ENSMUST00000190032 699 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.83□□□□□ -1.48
TraipQ8VIG6 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm38107-201ENSMUST00000194873 696 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm37882-201ENSMUST00000195254 196 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm45101-201ENSMUST00000208327 232 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm45427-201ENSMUST00000209572 1253 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm23627-201ENSMUST00000082459 107 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm22502-201ENSMUST00000082488 107 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm22977-201ENSMUST00000082615 107 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm24149-201ENSMUST00000082757 107 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm23970-201ENSMUST00000083319 107 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm26814-201ENSMUST00000181178 4149 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm43009-201ENSMUST00000199979 3566 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
TraipQ8VIG6 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.83□□□□□ -1.48
TraipQ8VIG6 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TraipQ8VIG6 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm14694-201ENSMUST00000121856 282 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm13363-201ENSMUST00000122008 522 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm25292-201ENSMUST00000122797 322 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm25637-201ENSMUST00000157529 107 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm15900-201ENSMUST00000161584 342 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm29813-201ENSMUST00000195856 447 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm43472-201ENSMUST00000200175 154 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TraipQ8VIG6 CT030182.2-201ENSMUST00000223569 620 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm9386-201ENSMUST00000095195 381 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Olfr713-201ENSMUST00000098139 975 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC5.82□□□□□ -1.48
TraipQ8VIG6 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TraipQ8VIG6 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.81□□□□□ -1.48
TraipQ8VIG6 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.81□□□□□ -1.48
TraipQ8VIG6 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.81□□□□□ -1.48
TraipQ8VIG6 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.81□□□□□ -1.48
TraipQ8VIG6 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TraipQ8VIG6 Gm14429-201ENSMUST00000121881 2024 ntBASIC5.81□□□□□ -1.48
TraipQ8VIG6 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TraipQ8VIG6 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TraipQ8VIG6 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TraipQ8VIG6 Gm22266-201ENSMUST00000104011 138 ntBASIC5.81□□□□□ -1.48
TraipQ8VIG6 Gm14670-201ENSMUST00000117327 337 ntBASIC5.81□□□□□ -1.48
TraipQ8VIG6 Gm2066-201ENSMUST00000118046 389 ntBASIC5.81□□□□□ -1.48
TraipQ8VIG6 Gm15231-201ENSMUST00000119174 447 ntBASIC5.81□□□□□ -1.48
TraipQ8VIG6 Gm16179-201ENSMUST00000120685 373 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms