Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm24124-201ENSMUST00000104103 132 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm22899-201ENSMUST00000104540 131 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm12285-201ENSMUST00000117347 233 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm23513-201ENSMUST00000158181 133 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm18406-201ENSMUST00000185872 669 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm19777-201ENSMUST00000191940 358 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm42818-201ENSMUST00000198869 987 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm8209-201ENSMUST00000206386 553 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 AC153541.1-201ENSMUST00000213786 294 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm8264-201ENSMUST00000217801 465 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 AC121844.1-201ENSMUST00000218706 137 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 AC158631.1-201ENSMUST00000219202 138 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm8158-201ENSMUST00000219220 465 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm8112-201ENSMUST00000219637 465 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 AC140254.1-201ENSMUST00000220063 331 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm16419-201ENSMUST00000221057 625 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 AC130823.2-201ENSMUST00000226169 290 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 AC118639.1-204ENSMUST00000226401 694 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm14415-201ENSMUST00000118260 1578 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm18491-201ENSMUST00000192492 1594 ntBASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ccdc9Q8VC31 Gm44846-201ENSMUST00000207127 3243 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm23594-201ENSMUST00000104307 134 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm12448-201ENSMUST00000118852 655 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm11904-201ENSMUST00000120562 248 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm14903-201ENSMUST00000122435 537 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm26310-201ENSMUST00000157766 117 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm22836-201ENSMUST00000158441 61 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm29332-201ENSMUST00000190829 227 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm44092-201ENSMUST00000204470 258 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Gm6240-201ENSMUST00000208014 473 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Supt4b-201ENSMUST00000214434 351 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 AC124399.1-201ENSMUST00000218334 590 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 AF357341-201ENSMUST00000083088 75 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 AC154681.1-201ENSMUST00000225876 1735 ntBASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Ccdc9Q8VC31 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm24096-201ENSMUST00000103905 110 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm15854-201ENSMUST00000118879 808 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm15480-201ENSMUST00000120442 519 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm14360-201ENSMUST00000120670 393 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm14979-201ENSMUST00000121561 1035 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm14907-201ENSMUST00000121948 854 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm7840-201ENSMUST00000122086 533 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm6568-201ENSMUST00000122274 697 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm24217-201ENSMUST00000158260 133 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm27317-201ENSMUST00000183533 95 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm27690-201ENSMUST00000184596 126 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm28740-201ENSMUST00000186142 215 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm29086-201ENSMUST00000186774 222 ntBASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Ccdc9Q8VC31 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms