Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm45380-201ENSMUST00000210465 315 ntBASIC3.67□□□□□ -1.82
Vps39Q8R5L3 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Vps39Q8R5L3 Gm18645-202ENSMUST00000212222 760 ntBASIC3.67□□□□□ -1.82
Vps39Q8R5L3 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.67□□□□□ -1.82
Vps39Q8R5L3 Gm18043-201ENSMUST00000216741 739 ntBASIC3.67□□□□□ -1.82
Vps39Q8R5L3 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.67□□□□□ -1.82
Vps39Q8R5L3 Gm16419-201ENSMUST00000221057 625 ntBASIC3.67□□□□□ -1.82
Vps39Q8R5L3 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.67□□□□□ -1.82
Vps39Q8R5L3 AC154727.1-201ENSMUST00000226537 499 ntBASIC3.67□□□□□ -1.82
Vps39Q8R5L3 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.67□□□□□ -1.82
Vps39Q8R5L3 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Vps39Q8R5L3 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm14119-201ENSMUST00000119511 235 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm15387-201ENSMUST00000120421 648 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm14008-201ENSMUST00000120483 274 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm22204-201ENSMUST00000122654 327 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm25047-201ENSMUST00000122667 104 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm22561-201ENSMUST00000157331 84 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Mir6715-201ENSMUST00000184990 57 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm38356-201ENSMUST00000194313 408 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm44650-201ENSMUST00000206929 194 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm46194-201ENSMUST00000218136 320 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm25581-201ENSMUST00000083410 164 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm26165-201ENSMUST00000083791 138 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Gm5518-201ENSMUST00000084171 648 ntBASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
Vps39Q8R5L3 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
Vps39Q8R5L3 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Vps39Q8R5L3 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.65□□□□□ -1.82
Vps39Q8R5L3 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.65□□□□□ -1.82
Vps39Q8R5L3 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.65□□□□□ -1.82
Vps39Q8R5L3 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm24244-201ENSMUST00000157317 130 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm23257-201ENSMUST00000158322 132 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm6947-201ENSMUST00000186254 78 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm37343-201ENSMUST00000192542 111 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm37319-201ENSMUST00000193500 636 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm29747-201ENSMUST00000194764 585 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm6590-201ENSMUST00000203343 687 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm6929-201ENSMUST00000210930 468 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Snord15a-201ENSMUST00000083888 148 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Vps39Q8R5L3 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Mir294-201ENSMUST00000104710 84 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Gm12578-201ENSMUST00000121244 417 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Gm11575-201ENSMUST00000122243 228 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Gm26219-201ENSMUST00000175216 71 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Mir6899-201ENSMUST00000184798 64 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Gm18727-201ENSMUST00000185981 553 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Gm43897-201ENSMUST00000204019 309 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.64□□□□□ -1.83
Vps39Q8R5L3 Gm3829-201ENSMUST00000222362 619 ntBASIC3.64□□□□□ -1.83
Vps39Q8R5L3 AC118006.2-201ENSMUST00000224167 962 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 134.4 ms