Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm28204-201ENSMUST00000185934 614 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm28290-201ENSMUST00000186505 614 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm28161-201ENSMUST00000186669 614 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm28749-209ENSMUST00000189599 614 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm29479-201ENSMUST00000190352 455 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm33163-201ENSMUST00000194504 614 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm37601-201ENSMUST00000194922 394 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm38008-201ENSMUST00000195333 518 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm43580-201ENSMUST00000202892 284 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 AC131747.1-201ENSMUST00000226159 793 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 AC109172.2-201ENSMUST00000228792 381 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 n-R5s79-201ENSMUST00000083071 120 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Mir465c-1-201ENSMUST00000093560 81 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ushbp1Q8R370 Gm42927-201ENSMUST00000200624 3841 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm42528-201ENSMUST00000200697 3418 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm22758-201ENSMUST00000102275 96 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm23273-201ENSMUST00000104058 135 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm11488-201ENSMUST00000117277 863 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm12691-201ENSMUST00000120186 456 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm22755-201ENSMUST00000157143 100 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm25559-201ENSMUST00000157182 74 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm24664-201ENSMUST00000158939 100 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm20526-201ENSMUST00000173416 158 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm25037-201ENSMUST00000175418 110 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm20612-201ENSMUST00000176318 236 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm22243-201ENSMUST00000178754 120 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm29228-201ENSMUST00000185489 418 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm28830-201ENSMUST00000188192 213 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm28474-201ENSMUST00000188501 315 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm18900-201ENSMUST00000193218 584 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm44348-201ENSMUST00000200165 122 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm34783-201ENSMUST00000209159 303 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 AC164117.2-201ENSMUST00000222090 327 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 AC156790.5-201ENSMUST00000227075 231 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm23460-201ENSMUST00000083258 109 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm26108-201ENSMUST00000083973 191 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm38106-201ENSMUST00000194107 2534 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm14404-201ENSMUST00000119117 1660 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm44567-201ENSMUST00000205645 2631 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Ushbp1Q8R370 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ushbp1Q8R370 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm38260-201ENSMUST00000193573 3995 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ushbp1Q8R370 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm14125-201ENSMUST00000113442 680 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5□□□□□ -1.61
Ushbp1Q8R370 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC5□□□□□ -1.61
Ushbp1Q8R370 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm24534-201ENSMUST00000157949 291 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC5□□□□□ -1.61
Ushbp1Q8R370 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5□□□□□ -1.61
Ushbp1Q8R370 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms