Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm45327-201ENSMUST00000211612 565 ntBASIC5.4□□□□□ -1.54
Ubp1Q811S7 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Ubp1Q811S7 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ubp1Q811S7 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.4□□□□□ -1.54
Ubp1Q811S7 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Ubp1Q811S7 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC5.4□□□□□ -1.54
Ubp1Q811S7 Gm23412-201ENSMUST00000083017 107 ntBASIC5.4□□□□□ -1.54
Ubp1Q811S7 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.4□□□□□ -1.54
Ubp1Q811S7 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Ubp1Q811S7 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.4□□□□□ -1.55
Ubp1Q811S7 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ubp1Q811S7 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
Ubp1Q811S7 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.4□□□□□ -1.55
Ubp1Q811S7 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Ubp1Q811S7 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.4□□□□□ -1.55
Ubp1Q811S7 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ubp1Q811S7 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Ubp1Q811S7 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Ubp1Q811S7 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.4□□□□□ -1.55
Ubp1Q811S7 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Ubp1Q811S7 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Ubp1Q811S7 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm3584-201ENSMUST00000173822 2565 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 n-R5s202-201ENSMUST00000104517 114 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm14220-201ENSMUST00000118114 449 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 AA413626-201ENSMUST00000121125 494 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm22718-201ENSMUST00000122701 315 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm23211-201ENSMUST00000122717 308 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm26169-201ENSMUST00000158420 135 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm6872-201ENSMUST00000165001 700 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm6543-201ENSMUST00000197353 808 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm38670-201ENSMUST00000199248 77 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm44655-201ENSMUST00000207768 423 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm45523-201ENSMUST00000210712 799 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 AC125543.4-201ENSMUST00000223385 117 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm7808-201ENSMUST00000082002 387 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Nsd1-201ENSMUST00000099490 12784 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm37868-201ENSMUST00000195578 2735 ntBASIC5.39□□□□□ -1.55
Ubp1Q811S7 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Ubp1Q811S7 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ubp1Q811S7 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Snord98-201ENSMUST00000116819 65 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 n-R5s192-201ENSMUST00000122577 119 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Gm23214-201ENSMUST00000122716 157 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Gm24504-201ENSMUST00000157679 100 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Gm22263-201ENSMUST00000180060 104 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Mir6911-201ENSMUST00000184241 69 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Ubp1Q811S7 Gm6651-201ENSMUST00000189471 271 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Gm44463-201ENSMUST00000198895 137 ntBASIC5.38□□□□□ -1.55
Ubp1Q811S7 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms