Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ttc28Q80XJ3 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC2.58□□□□□ -2
Ttc28Q80XJ3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ttc28Q80XJ3 Gm43826-201ENSMUST00000199604 2612 ntBASIC2.57□□□□□ -2
Ttc28Q80XJ3 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ttc28Q80XJ3 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ttc28Q80XJ3 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ttc28Q80XJ3 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ttc28Q80XJ3 Gm34314-201ENSMUST00000203622 367 ntBASIC2.57□□□□□ -2
Ttc28Q80XJ3 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.57□□□□□ -2
Ttc28Q80XJ3 Olfr192-201ENSMUST00000080251 925 ntBASIC2.57□□□□□ -2
Ttc28Q80XJ3 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ttc28Q80XJ3 Mir504-201ENSMUST00000093602 79 ntBASIC2.57□□□□□ -2
Ttc28Q80XJ3 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ttc28Q80XJ3 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ttc28Q80XJ3 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.57□□□□□ -2
Ttc28Q80XJ3 Gm23803-201ENSMUST00000104610 132 ntBASIC2.57□□□□□ -2
Ttc28Q80XJ3 Gm16445-201ENSMUST00000120399 714 ntBASIC2.57□□□□□ -2
Ttc28Q80XJ3 Gm24443-201ENSMUST00000157242 132 ntBASIC2.57□□□□□ -2
Ttc28Q80XJ3 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ttc28Q80XJ3 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC2.57□□□□□ -2
Ttc28Q80XJ3 Gm43717-201ENSMUST00000198684 310 ntBASIC2.57□□□□□ -2
Ttc28Q80XJ3 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ttc28Q80XJ3 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Ttc28Q80XJ3 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Gm14586-201ENSMUST00000119571 408 ntBASIC2.56□□□□□ -2
Ttc28Q80XJ3 Mir8096-201ENSMUST00000184526 127 ntBASIC2.56□□□□□ -2
Ttc28Q80XJ3 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Gm42758-201ENSMUST00000202146 283 ntBASIC2.56□□□□□ -2
Ttc28Q80XJ3 AC133283.1-201ENSMUST00000228443 859 ntBASIC2.56□□□□□ -2
Ttc28Q80XJ3 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Gm38240-201ENSMUST00000195110 2487 ntBASIC2.56□□□□□ -2
Ttc28Q80XJ3 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC2.56□□□□□ -2
Ttc28Q80XJ3 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ttc28Q80XJ3 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC2.56□□□□□ -2
Ttc28Q80XJ3 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.56□□□□□ -2
Ttc28Q80XJ3 Gm21960-201ENSMUST00000181924 452 ntBASIC2.56□□□□□ -2
Ttc28Q80XJ3 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ttc28Q80XJ3 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Ttc28Q80XJ3 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Gm26015-201ENSMUST00000104402 125 ntBASIC2.55□□□□□ -2
Ttc28Q80XJ3 Gm15844-201ENSMUST00000118016 576 ntBASIC2.55□□□□□ -2
Ttc28Q80XJ3 Gm11253-201ENSMUST00000118486 201 ntBASIC2.55□□□□□ -2
Ttc28Q80XJ3 Gm25863-201ENSMUST00000158249 329 ntBASIC2.55□□□□□ -2
Ttc28Q80XJ3 Mir6406-201ENSMUST00000183592 120 ntBASIC2.55□□□□□ -2
Ttc28Q80XJ3 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.55□□□□□ -2
Ttc28Q80XJ3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC2.55□□□□□ -2
Ttc28Q80XJ3 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Ttc28Q80XJ3 Gm18609-201ENSMUST00000203370 3601 ntBASIC2.55□□□□□ -2
Ttc28Q80XJ3 Gm26423-201ENSMUST00000104277 128 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm24274-201ENSMUST00000116787 124 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm12598-201ENSMUST00000117333 830 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm24379-201ENSMUST00000122695 86 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ttc28Q80XJ3 Mir7017-201ENSMUST00000184894 62 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm9696-202ENSMUST00000191541 830 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 CT030247.1-201ENSMUST00000216810 267 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm18388-201ENSMUST00000222339 557 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm13615-201ENSMUST00000120242 1612 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm25068-201ENSMUST00000103895 110 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Mir466k-201ENSMUST00000116774 122 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm24922-201ENSMUST00000158511 102 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm43746-201ENSMUST00000200028 317 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm9377-201ENSMUST00000207227 623 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm44623-201ENSMUST00000207934 434 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm18193-201ENSMUST00000210017 772 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm7588-201ENSMUST00000216866 571 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm10343-201ENSMUST00000096279 348 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm36951-201ENSMUST00000193840 2687 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC2.54□□□□□ -2
Ttc28Q80XJ3 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.54□□□□□ -2
Ttc28Q80XJ3 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms