Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm24289-201ENSMUST00000157629 135 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm23499-201ENSMUST00000157736 268 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm17060-201ENSMUST00000172394 824 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Mir5134-201ENSMUST00000175529 78 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm11392-201ENSMUST00000181419 710 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm11394-201ENSMUST00000181421 517 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm5974-201ENSMUST00000181607 986 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Mir6996-201ENSMUST00000183922 61 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm28872-201ENSMUST00000191518 158 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm7449-201ENSMUST00000194393 663 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm45523-201ENSMUST00000210712 799 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm45530-201ENSMUST00000211658 225 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 AC126673.2-201ENSMUST00000221052 686 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.53□□□□□ -1.68
Usp49Q6P9L4 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Usp49Q6P9L4 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.53□□□□□ -1.69
Usp49Q6P9L4 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm22269-201ENSMUST00000104002 130 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm11404-201ENSMUST00000120872 494 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm7618-201ENSMUST00000121643 171 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm23212-201ENSMUST00000122718 60 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm25058-201ENSMUST00000157365 128 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm25386-201ENSMUST00000157814 288 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm22501-201ENSMUST00000158981 127 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm26652-202ENSMUST00000181672 475 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm27538-201ENSMUST00000185065 294 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm28974-201ENSMUST00000187893 231 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm6680-201ENSMUST00000192789 950 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Trbv11-201ENSMUST00000194354 260 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm44371-201ENSMUST00000204148 467 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm35262-201ENSMUST00000215133 267 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 AC109214.2-201ENSMUST00000220089 358 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm12582-201ENSMUST00000030555 697 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm10042-201ENSMUST00000079884 78 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm24490-201ENSMUST00000083803 98 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Usp49Q6P9L4 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Usp49Q6P9L4 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Gm25420-201ENSMUST00000104216 127 ntBASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Gm23133-201ENSMUST00000104255 135 ntBASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Gm24792-201ENSMUST00000104286 128 ntBASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Gm13567-201ENSMUST00000118026 247 ntBASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Gm14901-201ENSMUST00000119001 283 ntBASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Gm11718-201ENSMUST00000119942 537 ntBASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Gm11260-201ENSMUST00000121163 942 ntBASIC4.51□□□□□ -1.69
Usp49Q6P9L4 Gm12045-201ENSMUST00000122122 573 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms