Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm23939-201ENSMUST00000082880 133 ntBASIC6.88□□□□□ -1.31
Clcn1Q64347 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Clcn1Q64347 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Clcn1Q64347 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Clcn1Q64347 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Clcn1Q64347 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.88□□□□□ -1.31
Clcn1Q64347 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Clcn1Q64347 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC6.88□□□□□ -1.31
Clcn1Q64347 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Clcn1Q64347 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Clcn1Q64347 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clcn1Q64347 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clcn1Q64347 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm14622-201ENSMUST00000117117 468 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm14570-201ENSMUST00000119444 391 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm11582-201ENSMUST00000121041 236 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm23700-201ENSMUST00000158842 102 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm21959-201ENSMUST00000178439 452 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm18828-202ENSMUST00000181035 310 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm28534-201ENSMUST00000187744 676 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm38044-201ENSMUST00000192964 487 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clcn1Q64347 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm43418-201ENSMUST00000201334 428 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm8745-201ENSMUST00000207846 782 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm45704-201ENSMUST00000212582 403 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 AC125531.1-201ENSMUST00000219849 221 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC6.87□□□□□ -1.31
Clcn1Q64347 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm23511-201ENSMUST00000083084 164 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm26263-201ENSMUST00000083281 164 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clcn1Q64347 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
Clcn1Q64347 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clcn1Q64347 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Clcn1Q64347 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clcn1Q64347 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Clcn1Q64347 Gm42494-201ENSMUST00000196515 3051 ntBASIC6.87□□□□□ -1.31
Clcn1Q64347 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Clcn1Q64347 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Clcn1Q64347 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
Clcn1Q64347 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clcn1Q64347 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Clcn1Q64347 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 Gm23327-201ENSMUST00000157420 78 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 Gm26170-201ENSMUST00000158419 148 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 Gm3027-201ENSMUST00000167579 451 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 Gm3104-201ENSMUST00000171004 473 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 Mir7031-201ENSMUST00000183860 65 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC6.86□□□□□ -1.31
Clcn1Q64347 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clcn1Q64347 Gm18698-201ENSMUST00000192327 668 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 Gm37272-201ENSMUST00000193401 488 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 AC155808.1-201ENSMUST00000219288 409 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC6.86□□□□□ -1.31
Clcn1Q64347 AC158142.1-201ENSMUST00000226721 416 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Clcn1Q64347 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Clcn1Q64347 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clcn1Q64347 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clcn1Q64347 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clcn1Q64347 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clcn1Q64347 Gm9700-201ENSMUST00000193786 1617 ntBASIC6.86□□□□□ -1.31
Clcn1Q64347 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Clcn1Q64347 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Clcn1Q64347 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clcn1Q64347 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Clcn1Q64347 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clcn1Q64347 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Clcn1Q64347 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Clcn1Q64347 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Clcn1Q64347 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.85□□□□□ -1.31
Clcn1Q64347 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Clcn1Q64347 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Clcn1Q64347 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Clcn1Q64347 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.85□□□□□ -1.31
Clcn1Q64347 Gm22718-201ENSMUST00000122701 315 ntBASIC6.85□□□□□ -1.31
Clcn1Q64347 Gm9294-201ENSMUST00000165198 789 ntBASIC6.85□□□□□ -1.31
Clcn1Q64347 Gm25156-201ENSMUST00000179809 79 ntBASIC6.85□□□□□ -1.31
Clcn1Q64347 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.85□□□□□ -1.31
Clcn1Q64347 Mir7012-201ENSMUST00000183900 64 ntBASIC6.85□□□□□ -1.31
Clcn1Q64347 Gm27540-201ENSMUST00000184950 187 ntBASIC6.85□□□□□ -1.31
Clcn1Q64347 Gm43444-201ENSMUST00000198123 291 ntBASIC6.85□□□□□ -1.31
Clcn1Q64347 Gm43529-201ENSMUST00000199178 412 ntBASIC6.85□□□□□ -1.31
Clcn1Q64347 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms