Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm24210-201ENSMUST00000158263 133 ntBASIC2.43□□□□□ -2.02
Col7a1Q63870 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC2.43□□□□□ -2.02
Col7a1Q63870 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Col7a1Q63870 Gm28146-201ENSMUST00000185517 701 ntBASIC2.43□□□□□ -2.02
Col7a1Q63870 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Col7a1Q63870 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Col7a1Q63870 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col7a1Q63870 AC127371.1-201ENSMUST00000228516 312 ntBASIC2.43□□□□□ -2.02
Col7a1Q63870 Mir127-201ENSMUST00000093568 70 ntBASIC2.43□□□□□ -2.02
Col7a1Q63870 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Col7a1Q63870 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col7a1Q63870 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col7a1Q63870 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC2.43□□□□□ -2.02
Col7a1Q63870 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Col7a1Q63870 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.43□□□□□ -2.02
Col7a1Q63870 Gm16101-201ENSMUST00000160695 430 ntBASIC2.43□□□□□ -2.02
Col7a1Q63870 Gm23268-201ENSMUST00000175494 78 ntBASIC2.43□□□□□ -2.02
Col7a1Q63870 Gm8807-201ENSMUST00000179328 492 ntBASIC2.43□□□□□ -2.02
Col7a1Q63870 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC2.43□□□□□ -2.02
Col7a1Q63870 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Col7a1Q63870 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC2.43□□□□□ -2.02
Col7a1Q63870 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Col7a1Q63870 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Col7a1Q63870 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
Col7a1Q63870 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Col7a1Q63870 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
Col7a1Q63870 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Col7a1Q63870 Gm14649-201ENSMUST00000121814 324 ntBASIC2.42□□□□□ -2.02
Col7a1Q63870 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Col7a1Q63870 Gm23592-201ENSMUST00000157859 117 ntBASIC2.42□□□□□ -2.02
Col7a1Q63870 Gm26622-201ENSMUST00000180520 298 ntBASIC2.42□□□□□ -2.02
Col7a1Q63870 Gm43975-201ENSMUST00000203023 481 ntBASIC2.42□□□□□ -2.02
Col7a1Q63870 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Col7a1Q63870 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Col7a1Q63870 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Col7a1Q63870 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.42□□□□□ -2.02
Col7a1Q63870 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Col7a1Q63870 Mir8096-201ENSMUST00000184526 127 ntBASIC2.42□□□□□ -2.02
Col7a1Q63870 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.42□□□□□ -2.02
Col7a1Q63870 Gm5552-201ENSMUST00000197149 515 ntBASIC2.42□□□□□ -2.02
Col7a1Q63870 Gm43476-201ENSMUST00000197873 405 ntBASIC2.42□□□□□ -2.02
Col7a1Q63870 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC2.42□□□□□ -2.02
Col7a1Q63870 AC158523.1-201ENSMUST00000221398 328 ntBASIC2.42□□□□□ -2.02
Col7a1Q63870 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.42□□□□□ -2.02
Col7a1Q63870 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Col7a1Q63870 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Col7a1Q63870 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Col7a1Q63870 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Col7a1Q63870 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col7a1Q63870 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col7a1Q63870 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Col7a1Q63870 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm23322-201ENSMUST00000104464 167 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm14593-201ENSMUST00000119948 294 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm21960-201ENSMUST00000181924 452 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm29335-201ENSMUST00000188361 459 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm44477-201ENSMUST00000199661 110 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm43696-201ENSMUST00000199385 6071 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm5347-201ENSMUST00000210542 2327 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm13121-201ENSMUST00000120637 632 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm24532-201ENSMUST00000157951 286 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.41□□□□□ -2.02
Col7a1Q63870 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Col7a1Q63870 Gm18015-201ENSMUST00000214879 316 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 AC133283.1-201ENSMUST00000228443 859 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Col7a1Q63870 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Col7a1Q63870 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Col7a1Q63870 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC2.41□□□□□ -2.02
Col7a1Q63870 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col7a1Q63870 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col7a1Q63870 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Col7a1Q63870 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.02
Col7a1Q63870 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Col7a1Q63870 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col7a1Q63870 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Col7a1Q63870 Gm36951-201ENSMUST00000193840 2687 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms