Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 AC154640.4-201ENSMUST00000226647 4640 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm37329-201ENSMUST00000192973 2057 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm38198-201ENSMUST00000191772 3581 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Gm42923-201ENSMUST00000198438 2896 ntBASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Scaf1Q5U4C3 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm12007-201ENSMUST00000120978 597 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm12413-201ENSMUST00000121508 312 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm17119-201ENSMUST00000163943 280 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm29231-201ENSMUST00000179850 319 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm26189-201ENSMUST00000179879 107 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm26701-201ENSMUST00000181571 234 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm27551-201ENSMUST00000184258 77 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm9134-201ENSMUST00000193186 551 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm44074-201ENSMUST00000204562 337 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 AC161114.1-201ENSMUST00000218223 474 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 AC117588.2-201ENSMUST00000228340 311 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm43185-201ENSMUST00000197507 2775 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm37551-201ENSMUST00000195556 2861 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm40020-201ENSMUST00000215677 1635 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm37205-201ENSMUST00000194820 2736 ntBASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Scaf1Q5U4C3 Gm37018-201ENSMUST00000192441 3869 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm14421-201ENSMUST00000121755 1958 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Mir193b-201ENSMUST00000103784 79 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm25418-201ENSMUST00000104214 129 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm16106-201ENSMUST00000119187 294 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm14972-201ENSMUST00000121780 364 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm13077-201ENSMUST00000121941 484 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm20674-201ENSMUST00000177452 369 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm26430-201ENSMUST00000178054 107 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm23793-201ENSMUST00000179396 117 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm21978-201ENSMUST00000179696 377 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm27543-201ENSMUST00000183562 177 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm28058-201ENSMUST00000186421 264 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm29196-201ENSMUST00000189239 618 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm37682-201ENSMUST00000191776 522 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm17775-201ENSMUST00000198542 258 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm43631-201ENSMUST00000202011 369 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm44016-201ENSMUST00000203463 164 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 AC154521.1-201ENSMUST00000222635 330 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Gm17969-201ENSMUST00000185706 2557 ntBASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Scaf1Q5U4C3 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC7.02□□□□□ -1.28
Scaf1Q5U4C3 Gm42725-201ENSMUST00000199296 4193 ntBASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 Gm23169-201ENSMUST00000157157 112 ntBASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 Gm23327-201ENSMUST00000157420 78 ntBASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 Scarna10-201ENSMUST00000158992 325 ntBASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 Gm16038-201ENSMUST00000159317 193 ntBASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 Mir5099-201ENSMUST00000175257 74 ntBASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Scaf1Q5U4C3 Gm27190-201ENSMUST00000184890 542 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms